diff --git a/arkindex/dataimport/tasks/base.py b/arkindex/dataimport/tasks/base.py index cafb6d1c9a5cb42a12ddefee092f089a4db24ec5..0f97d68f068af28216cb3026f6e13e16575ed85f 100644 --- a/arkindex/dataimport/tasks/base.py +++ b/arkindex/dataimport/tasks/base.py @@ -2,8 +2,9 @@ from celery import shared_task from celery.signals import task_postrun from celery.states import EXCEPTION_STATES from django.conf import settings +from arkindex_common.ml_tool import MLTool, MLToolType from arkindex.project.celery import ReportingTask -from arkindex.documents.models import Element, ElementType, Page, TranscriptionType +from arkindex.documents.models import Element, ElementType, Page, TranscriptionType, DataSource, Classification from arkindex.documents.importer import import_page from arkindex.documents.tasks import generate_thumbnail from arkindex.images.models import ImageServer, ImageStatus @@ -59,8 +60,10 @@ def build_volume(self, files, dataimport, server_id=settings.LOCAL_IMAGESERVER_I generate_thumbnail(volume.id) return { 'pages': pages, - 'classifier': settings.ML_DEFAULT_CLASSIFIER, - 'recognizer': settings.ML_DEFAULT_RECOGNIZER, + 'tools': [ + (MLToolType.Classifier, settings.ML_DEFAULT_CLASSIFIER), + (MLToolType.Recognizer, settings.ML_DEFAULT_RECOGNIZER), + ], } @@ -73,35 +76,79 @@ def save_ml_results(self, results, **kwargs): ''' assert isinstance(results, dict) - pages = Page.objects.filter(pk__in=list(results.keys())) - for page in pages: - result = results.get(page.id) - if result is None: - continue - - tr_items = result['zones'] - # Parse transcription types - for item in tr_items: - item['type'] = TranscriptionType(item['type']) - - trpolygons = build_transcriptions( - parent=page, - image=page.zone.image, - items=tr_items, - ) - - if trpolygons: - transcriptions, _ = save_transcriptions(*trpolygons) - self.report_message('Saved transcriptions for {}'.format(page)) - index_transcriptions(transcriptions) - self.report_message('Indexed transcriptions for {}'.format(page)) - - page.build_text() - page.classification = result['classification'] - page.save() - self.report_message("Updated ML results for {}".format(page)) - - return list(map(str, results.keys())) + page_ids = set() + for tool_type, slugs in results.items(): + + if not isinstance(tool_type, MLToolType): + tool_type = MLToolType(tool_type) + + for slug, pages in slugs.items(): + tool = MLTool.get(settings.ML_CLASSIFIERS_DIR, tool_type, slug) + source = DataSource.from_ml_tool(tool) + + for page_id, result in pages.items(): + page = Page.objects.select_related('zone__image').get(id=page_id) + + if tool.type == MLToolType.Classifier: + Classification.objects.bulk_create([ + Classification( + page=page, + source=source, + class_name=data['label'], + confidence=data['probability'], + ) + for data in result + ]) + + self.report_message("Saved classifications for {}".format(page)) + + elif tool.type == MLToolType.Recognizer: + + # Parse transcription types + for item in result: + item['type'] = TranscriptionType(item['type']) + + trpolygons = build_transcriptions( + parent=page, + source=source, + image=page.zone.image, + items=result, + ) + + if not trpolygons: + continue + transcriptions, _ = save_transcriptions(*trpolygons) + self.report_message('Saved transcriptions for {}'.format(page)) + + # Build the Page's Page transcription + text = '\n'.join( + t.text + for t in sorted( + page.transcriptions.filter(type=TranscriptionType.Line).prefetch_related('zone'), + key=lambda t: (t.zone.polygon.center.y, t.zone.polygon.center.x), + ) + ) + # Add the (page transcription ID, page ID) tuple to the transcriptions tuple + transcriptions += ( + ( + page.transcriptions.create( + type=TranscriptionType.Page, + text=text, + zone=page.zone, + source=source, + ).id, + page.id, + ), + ) + + index_transcriptions(transcriptions) + self.report_message('Indexed transcriptions for {}'.format(page)) + else: + raise ValueError('Unknown ML tool type') + + page_ids.add(page.id) + + return list(page_ids) @task_postrun.connect diff --git a/arkindex/dataimport/tests/mocks/ml_results.json b/arkindex/dataimport/tests/mocks/ml_results.json index d5c43c8f67f9fe8ead80fe964de9e2529648e405..b945131c62920ec388e2df638632cea2802c5713 100644 --- a/arkindex/dataimport/tests/mocks/ml_results.json +++ b/arkindex/dataimport/tests/mocks/ml_results.json @@ -1,25351 +1,25351 @@ { - 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It won't even get off the", - "polygon": [ - [ - 517, - 848 - ], - [ - 2341, - 848 - ], - [ - 2341, - 904 - ], - [ - 517, - 904 - ] - ] - }, - { - "score": 0.96, - "type": "word", - "text": "Kissinger:", - "polygon": [ - [ - 517, - 848 - ], - [ - 775, - 848 - ], - [ - 775, - 896 - ], - [ - 517, - 896 - ] - ] - }, - { - "score": 0.95, - "type": "word", - "text": "A", - "polygon": [ - [ - 817, - 850 - ], - [ - 851, - 850 - ], - [ - 851, - 881 - ], - [ - 817, - 881 - ] - ] - }, - { - "score": 0.96, - "type": "word", - "text": "good", - "polygon": [ - [ - 877, - 851 - ], - [ - 988, - 851 - ], - [ - 988, - 893 - ], - [ - 877, - 893 - ] - ] - }, - { - "score": 0.96, - "type": "word", - "text": "faith", - "polygon": [ - [ - 1012, - 851 - ], - [ - 1123, - 851 - ], - [ - 1123, - 886 - ], - [ - 1012, - 886 - ] - ] - }, - { - "score": 0.96, - "type": "word", - "text": "effort", - "polygon": [ - [ - 1144, - 853 - ], - [ - 1281, - 853 - ], - [ - 1281, - 886 - ], - [ - 1144, - 886 - ] - ] - }, - { - "score": 0.96, - "type": "word", - "text": "is", - "polygon": [ - [ - 1305, - 854 - ], - [ - 1344, - 854 - ], - [ - 1344, - 887 - ], - [ - 1305, - 887 - ] - ] - }, - { - "score": 0.96, - "type": "word", - "text": "bound", - "polygon": [ - [ - 1370, - 854 - ], - [ - 1509, - 854 - ], - [ - 1509, - 889 - ], - [ - 1370, - 889 - ] - ] - }, - { - "score": 0.95, - "type": "word", - "text": "to", - "polygon": [ - [ - 1533, - 860 - ], - [ - 1577, - 860 - ], - [ - 1577, - 890 - ], - [ - 1533, - 890 - ] - ] - }, - { - "score": 0.92, - "type": "word", - "text": "fail.", - "polygon": [ - [ - 1599, - 856 - ], - [ - 1698, - 856 - ], - [ - 1698, - 893 - ], - [ - 1599, - 893 - ] - ] - }, - { - "score": 0.95, - "type": "word", - "text": "It", - "polygon": [ - [ - 1751, - 860 - ], - [ - 1786, - 860 - ], - [ - 1786, - 892 - ], - [ - 1751, - 892 - ] - ] - }, - { - "score": 0.96, - "type": "word", - "text": "won't", - "polygon": [ - [ - 1810, - 862 - ], - [ - 1935, - 862 - ], - [ - 1935, - 893 - ], - [ - 1810, - 893 - ] - ] - }, - { - "score": 0.96, - "type": "word", - "text": "even", - "polygon": [ - [ - 1959, - 869 - ], - [ - 2068, - 869 - ], - [ - 2068, - 892 - ], - [ - 1959, - 892 - ] - ] - }, - { - "score": 0.96, - "type": "word", - "text": "get", - "polygon": [ - [ - 2091, - 865 - ], - [ - 2163, - 865 - ], - [ - 2163, - 904 - ], - [ - 2091, - 904 - ] - ] - }, - { - "score": 0.96, - "type": "word", - "text": "off", - "polygon": [ - [ - 2187, - 862 - ], - [ - 2247, - 862 - ], - [ - 2247, - 895 - ], - [ - 2187, - 895 - ] - ] - }, - { - "score": 0.96, - "type": "word", - "text": "the", - "polygon": [ - [ - 2268, - 863 - ], - [ - 2341, - 863 - ], - [ - 2341, - 896 - ], - [ - 2268, - 896 - ] - ] - }, - { - "score": 0.7025, - "type": "line", - "text": "' ground. 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CasefilW 54214", + "polygon": [ + [ + 1741, + 400 + ], + [ + 2374, + 400 + ], + [ + 2374, + 426 + ], + [ + 1741, + 426 + ] + ] + }, + { + "score": 0.43, + "type": "word", + "text": "E107", + "polygon": [ + [ + 1741, + 402 + ], + [ + 1828, + 402 + ], + [ + 1828, + 420 + ], + [ + 1741, + 420 + ] + ] + }, + { + "score": 0.78, + "type": "word", + "text": "Nore).", + "polygon": [ + [ + 1853, + 402 + ], + [ + 1988, + 402 + ], + [ + 1988, + 426 + ], + [ + 1853, + 426 + ] + ] + }, + { + "score": 0.0, + "type": "word", + "text": "CasefilW", + "polygon": [ + [ + 2046, + 400 + ], + [ + 2234, + 400 + ], + [ + 2234, + 423 + ], + [ + 2046, + 423 + ] + ] + }, + { + "score": 0.94, + "type": "word", + "text": "54214", + "polygon": [ + [ + 2261, + 402 + ], + [ + 2374, + 402 + ], + [ + 2374, + 420 + ], + [ + 2261, + 420 + ] + ] + }, + { + "score": 0.95, + "type": "line", + "text": " ", + "polygon": [ + [ + 1731, + 278 + ], + [ + 2479, + 278 + ], + [ + 2479, + 473 + ], + [ + 1731, + 473 + ] + ] + }, + { + "score": 0.95, + "type": "word", + "text": " ", + "polygon": [ + [ + 1731, + 278 + ], + [ + 2479, + 278 + ], + [ + 2479, + 473 + ], + [ + 1731, + 473 + ] + ] + }, + { + "score": 0.9442857142857142, + "type": "line", + "text": "Memorandum of conversation, participants: Ford, Kissinger, Scoweroft.", + "polygon": [ + [ + 700, + 2123 + ], + [ + 1903, + 2123 + ], + [ + 1903, + 2163 + ], + [ + 700, + 2163 + ] + ] + }, + { + "score": 0.96, + "type": "word", + "text": "Memorandum", + "polygon": [ + [ + 700, + 2126 + ], + [ + 930, + 2126 + ], + [ + 930, + 2156 + ], + [ + 700, + 2156 + ] + ] + }, + { + "score": 0.95, + "type": "word", + "text": "of", + "polygon": [ + [ + 944, + 2126 + ], + [ + 980, + 2126 + ], + [ + 980, + 2154 + ], + [ + 944, + 2154 + ] + ] + }, + { + "score": 0.95, + "type": "word", + "text": "conversation,", + "polygon": [ + [ + 989, + 2126 + ], + [ + 1206, + 2126 + ], + [ + 1206, + 2160 + ], + [ + 989, + 2160 + ] + ] + }, + { + "score": 0.95, + "type": "word", + "text": "participants:", + "polygon": [ + [ + 1221, + 2124 + ], + [ + 1420, + 2124 + ], + [ + 1420, + 2163 + ], + [ + 1221, + 2163 + ] + ] + }, + { + "score": 0.96, + "type": "word", + "text": "Ford,", + "polygon": [ + [ + 1449, + 2124 + ], + [ + 1532, + 2124 + ], + [ + 1532, + 2160 + ], + [ + 1449, + 2160 + ] + ] + }, + { + "score": 0.93, + "type": "word", + "text": "Kissinger,", + "polygon": [ + [ + 1549, + 2124 + ], + [ + 1712, + 2124 + ], + [ + 1712, + 2162 + ], + [ + 1549, + 2162 + ] + ] + }, + { + "score": 0.91, + "type": "word", + "text": "Scoweroft.", + "polygon": [ + [ + 1729, + 2123 + ], + [ + 1903, + 2123 + ], + [ + 1903, + 2153 + ], + [ + 1729, + 2153 + ] + ] + }, + { + "score": 0.95, + "type": "line", + "text": " ", + "polygon": [ + [ + 49, + 3129 + ], + [ + 2452, + 3129 + ], + [ + 2452, + 3140 + ], + [ + 49, + 3140 + ] + ] + }, + { + "score": 0.95, + "type": "word", + "text": " ", + "polygon": [ + [ + 49, + 3129 + ], + [ + 2452, + 3129 + ], + [ + 2452, + 3140 + ], + [ + 49, + 3140 + ] + ] + }, + { + "score": 0.29, + "type": "line", + "text": "v9.1", + "polygon": [ + [ + 82, + 3167 + ], + [ + 129, + 3167 + ], + [ + 129, + 3191 + ], + [ + 82, + 3191 + ] + ] + }, + { + "score": 0.29, + "type": "word", + "text": "v9.1", + "polygon": [ + [ + 82, + 3167 + ], + [ + 129, + 3167 + ], + [ + 129, + 3191 + ], + [ + 82, + 3191 + ] + ] + }, + { + "score": 0.776, + "type": "line", + "text": "HW 542714 Docld:321057253 Page 1", + "polygon": [ + [ + 66, + 3206 + ], + [ + 860, + 3206 + ], + [ + 860, + 3236 + ], + [ + 66, + 3236 + ] + ] + }, + { + "score": 0.87, + "type": "word", + "text": "HW", + "polygon": [ + [ + 66, + 3206 + ], + [ + 115, + 3206 + ], + [ + 115, + 3230 + ], + [ + 66, + 3230 + ] + ] + }, + { + "score": 0.68, + "type": "word", + "text": "542714", + "polygon": [ + [ + 144, + 3206 + ], + [ + 262, + 3206 + ], + [ + 262, + 3230 + ], + [ + 144, + 3230 + ] + ] + }, + { + "score": 0.46, + "type": "word", + "text": "Docld:321057253", + "polygon": [ + [ + 315, + 3206 + ], + [ + 661, + 3206 + ], + [ + 661, + 3230 + ], + [ + 315, + 3230 + ] + ] + }, + { + "score": 0.92, + "type": "word", + "text": "Page", + "polygon": [ + [ + 713, + 3206 + ], + [ + 810, + 3206 + ], + [ + 810, + 3236 + ], + [ + 713, + 3236 + ] + ] + }, + { + "score": 0.95, + "type": "word", + "text": "1", + "polygon": [ + [ + 840, + 3206 + ], + [ + 860, + 3206 + ], + [ + 860, + 3230 + ], + [ + 840, + 3230 + ] + ] + } + ] + } } } diff --git a/arkindex/dataimport/tests/mocks/tesseract/config.yml b/arkindex/dataimport/tests/mocks/tesseract/config.yml new file mode 100644 index 0000000000000000000000000000000000000000..27a89873a0a830b9cea4c8dda9959cbb9114c979 --- /dev/null +++ b/arkindex/dataimport/tests/mocks/tesseract/config.yml @@ -0,0 +1,8 @@ +--- +name: Base Tesseract 4.0 +type: recognizer +slug: tesseract +version: 1.0 + +# No parameters ! +tesseract: [] diff --git a/arkindex/dataimport/tests/mocks/tobacco/config.yml b/arkindex/dataimport/tests/mocks/tobacco/config.yml new file mode 100644 index 0000000000000000000000000000000000000000..5cccdb3bb203864945c1292062c31b571f0ea7be --- /dev/null +++ b/arkindex/dataimport/tests/mocks/tobacco/config.yml @@ -0,0 +1,27 @@ +--- +name: Tobaccos archives +slug: tobacco +version: 0.1.0 +type: classifier +classes: + - letter + - form + - email + - handwritten + - advertisement + - scientific report + - scientific publication + - specification + - file folder + - news article + - budget + - invoice + - presentation + - questionnaire + - resume + - memo + +keras: + model: model.hdf5 + image_width: 224 + image_height: 224 diff --git a/arkindex/dataimport/tests/test_tasks.py b/arkindex/dataimport/tests/test_tasks.py index 3b481bbaa3e95de5d62265694f829c79b08a8af3..07ba3934ac25ec21bfeef3151555dae84b70536b 100644 --- a/arkindex/dataimport/tests/test_tasks.py +++ b/arkindex/dataimport/tests/test_tasks.py @@ -21,7 +21,9 @@ class TestTasks(FixtureMixin, RedisMockAPITestCase): """ Test data imports tasks """ + def test_save_ml_results(self): + dog_img = self.imgsrv.images.create(path='dog', width=100, height=100) cat_img = self.imgsrv.images.create(path='cat', width=100, height=100) @@ -31,65 +33,73 @@ class TestTasks(FixtureMixin, RedisMockAPITestCase): dog = Page.objects.create(corpus=self.corpus, name='A dog', zone=dog_zone) cat = Page.objects.create(corpus=self.corpus, name='A cat', zone=cat_zone) - classification = { - dog.id: { - 'classification': [ - { - 'label': 'dog', - 'probability': 0.9, - } - ], - 'zones': [ - { - 'type': 'word', - 'polygon': [[0, 0], [0, 10], [10, 10], [10, 0]], - 'text': 'woof', - 'score': 0.8 - } - ], - }, - cat.id: { - 'classification': [ - { - 'label': 'cat', - 'probability': 0.8, - } - ], - 'zones': [ - { - 'type': 'line', - 'polygon': [[0, 0], [0, 20], [20, 20], [20, 0]], - 'text': 'meow', - 'score': 0.9 - } - ], + data = { + 'classifier': { + 'tobacco': { + dog.id: [ + { + 'label': 'dog', + 'probability': 0.9, + }, + ], + cat.id: [ + { + 'label': 'cat', + 'probability': 0.8, + }, + ] + }, }, + 'recognizer': { + 'tesseract': { + dog.id: [ + { + 'type': 'word', + 'polygon': [[0, 0], [0, 10], [10, 10], [10, 0]], + 'text': 'woof', + 'score': 0.8 + }, + ], + cat.id: [ + { + 'type': 'line', + 'polygon': [[0, 0], [0, 20], [20, 20], [20, 0]], + 'text': 'meow', + 'score': 0.9 + }, + ] + }, + } } - save_ml_results(classification) + + with self.settings(ML_CLASSIFIERS_DIR=FIXTURES): + save_ml_results(data) dog.refresh_from_db() - self.assertEqual(dog.classification, [{ - 'label': 'dog', - 'probability': 0.9, - }]) - self.assertEqual(dog.text, '') - dog_ts = dog.transcriptions.get() - self.assertEqual(dog_ts.type, TranscriptionType.Word) + self.assertEqual(dog.classifications.count(), 1) + dog_cls = dog.classifications.get() + self.assertEqual(dog_cls.class_name, 'dog') + self.assertEqual(dog_cls.confidence, 0.9) + dog_ts = dog.transcriptions.get(type=TranscriptionType.Word) self.assertEqual(dog_ts.text, 'woof') self.assertEqual(dog_ts.score, 0.8) self.assertEqual(dog_ts.zone.polygon, [(0, 0), (0, 10), (10, 10), (10, 0), (0, 0)]) + dog_ts = dog.transcriptions.get(type=TranscriptionType.Page) + self.assertEqual(dog_ts.text, '') + self.assertEqual(dog_ts.zone.polygon, [(0, 0), (0, 100), (100, 100), (100, 0), (0, 0)]) cat.refresh_from_db() - self.assertEqual(cat.classification, [{ - 'label': 'cat', - 'probability': 0.8, - }]) - self.assertEqual(cat.text, 'meow') - cat_ts = cat.transcriptions.get() - self.assertEqual(cat_ts.type, TranscriptionType.Line) + self.assertEqual(cat.classifications.count(), 1) + cat_cls = cat.classifications.get() + self.assertEqual(cat_cls.class_name, 'cat') + self.assertEqual(cat_cls.confidence, 0.8) + cat_ts = cat.transcriptions.get(type=TranscriptionType.Line) self.assertEqual(cat_ts.text, 'meow') self.assertEqual(cat_ts.score, 0.9) self.assertEqual(cat_ts.zone.polygon, [(0, 0), (0, 20), (20, 20), (20, 0), (0, 0)]) + cat_ts = cat.transcriptions.get(type=TranscriptionType.Page) + self.assertEqual(cat_ts.text, 'meow') + self.assertEqual(cat_ts.zone.polygon, [(0, 0), (0, 100), (100, 100), (100, 0), (0, 0)]) def test_command(self): # No tasks at first @@ -229,16 +239,19 @@ class TestTasks(FixtureMixin, RedisMockAPITestCase): Test on a real complex case, with data crashing (initially) the save function """ - # Load mock results from worker-ml + # Load mock results from worker-ml and build images/zones/pages path = os.path.join(FIXTURES, 'ml_results.json') self.assertTrue(os.path.exists(path)) - results = { - uuid.UUID(k): v - for k, v in json.load(open(path)).items() - } - # Build needed page/zone/image - for page_id in results.keys(): + results, page_ids = {}, set() + for tool_type, tool_slugs in json.load(open(path)).items(): + for tool_slug, pages in tool_slugs.items(): + for page_id, result in pages.items(): + results.setdefault(tool_type, {}).setdefault(tool_slug, {})[uuid.UUID(page_id)] = result + page_ids.add(page_id) + + # Create images, zones and pages + for page_id in page_ids: image = self.imgsrv.images.create( path='/crash/{}'.format(page_id), width=200, @@ -261,11 +274,12 @@ class TestTasks(FixtureMixin, RedisMockAPITestCase): # Save results in hierarchy # Initially, that was failing with an hard Postgresql COPY error - save_ml_results(results) + with self.settings(ML_CLASSIFIERS_DIR=FIXTURES): + save_ml_results(results) - page_id, data = next(iter(results.items())) # Take one page + page_id, data = next(iter(results['recognizer']['tesseract'].items())) # Take one page page = Page.objects.get(id=page_id) - for ts_data in data['zones'][:5]: # Take the first five transcriptions + for ts_data in data[:5]: # Take the first five transcriptions self.assertEqual(page.transcriptions.filter( type=ts_data['type'], text=ts_data['text'], diff --git a/arkindex/documents/admin.py b/arkindex/documents/admin.py index d016502169b3bb66663368673442b841fedd7ae6..45515feecb8969ea2b2ee485247cf0d1f9109eec 100644 --- a/arkindex/documents/admin.py +++ b/arkindex/documents/admin.py @@ -2,7 +2,8 @@ from django.contrib import admin from django.conf.urls import url from django.urls import reverse from django.utils.html import format_html -from arkindex.documents.models import Corpus, Page, Element, ElementType, Act, Transcription, MetaData +from arkindex.documents.models import \ + Corpus, Page, Element, ElementType, Act, Transcription, MetaData, Classification, DataSource from arkindex.documents.views import DumpActs from arkindex.dataimport.models import Event from enumfields.admin import EnumFieldListFilter @@ -12,16 +13,26 @@ class CorpusAdmin(admin.ModelAdmin): list_display = ('id', 'name', 'public', ) +class DataSourceAdmin(admin.ModelAdmin): + list_display = ('id', 'type', 'slug', 'revision', 'internal') + list_filter = [('type', EnumFieldListFilter), 'internal'] + readonly_fields = ('id', ) + + class EventInline(admin.TabularInline): model = Event +class ClassificationInline(admin.TabularInline): + model = Classification + + class PageAdmin(admin.ModelAdmin): list_display = ('id', 'name', 'page_type', 'nb', 'direction', ) - list_filter = [('page_type', EnumFieldListFilter)] - fields = ('id', 'name', 'folio', 'page_type', 'nb', 'direction', 'classification', 'text') + list_filter = [('page_type', EnumFieldListFilter), 'corpus'] + fields = ('id', 'name', 'folio', 'page_type', 'nb', 'direction') readonly_fields = ('id', ) - inlines = (EventInline, ) + inlines = (EventInline, ClassificationInline, ) class MetaDataInline(admin.TabularInline): @@ -64,13 +75,14 @@ class ActAdmin(admin.ModelAdmin): class TranscriptionAdmin(admin.ModelAdmin): list_display = ('id', 'text', 'score', 'element', ) - list_filter = [('type', EnumFieldListFilter), ] - fields = ('id', 'text', 'score', 'element', 'zone', ) + list_filter = [('type', EnumFieldListFilter), ('source', EnumFieldListFilter)] + fields = ('id', 'text', 'score', 'element', 'zone', 'source', ) readonly_fields = ('id', ) raw_id_fields = ('element', 'zone', ) admin.site.register(Corpus, CorpusAdmin) +admin.site.register(DataSource, DataSourceAdmin) admin.site.register(Page, PageAdmin) admin.site.register(Element, ElementAdmin) admin.site.register(Act, ActAdmin) diff --git a/arkindex/documents/api/transcriptions.py b/arkindex/documents/api/transcriptions.py index 34a84f6d0c084099ce482fd54d1ed1885118111d..e5cf52ff33900efdb4d8e195874263af572b1b09 100644 --- a/arkindex/documents/api/transcriptions.py +++ b/arkindex/documents/api/transcriptions.py @@ -23,10 +23,12 @@ class TranscriptionBulk(CreateAPIView): def perform_create(self, serializer): parent = serializer.validated_data['parent'] + source = serializer.validated_data['source'] image = serializer.validated_data['image'] trpolygons = build_transcriptions( image=image, parent=parent, + source=source, items=[ { 'polygon': tr['polygon'], @@ -69,6 +71,7 @@ class TranscriptionCreate(CreateAPIView): ts, created = Transcription.objects.get_or_create( element=element, + source=serializer.validated_data['source'], type=transcription_type, zone=ts_zone, text=serializer.validated_data['text'], diff --git a/arkindex/documents/fixtures/data.json b/arkindex/documents/fixtures/data.json index 7a5810a7ca6c78bc740d7890ff296bc9efb2a51c..053844e15b9bccaf2329681cf338b0d9a4f55fc8 100644 --- a/arkindex/documents/fixtures/data.json +++ b/arkindex/documents/fixtures/data.json @@ -1,22 +1,22 @@ [ { "model": "dataimport.repository", - "pk": "739fcb34-e4d4-4365-a810-8801623dadbd", + "pk": "f583934a-e0d4-4892-ba00-938f1561c4e3", "fields": { "url": "http://gitlab/repo", "hook_token": "hook-token", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "credentials": "675eaaa8-3152-4fe5-a891-fee8f9fbd56c", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "credentials": "d7d2a36a-a87a-4180-8bf2-c827f01828b2", "provider_name": "GitLabProvider" } }, { "model": "dataimport.revision", - "pk": "7b5f7f19-0439-445c-b38b-3a4425aab113", + "pk": "98f3623a-dc77-42ce-92ae-670f3f9348f3", "fields": { - "created": "2018-11-26T11:00:55.886Z", - "updated": "2018-11-26T11:00:55.886Z", - "repo": "739fcb34-e4d4-4365-a810-8801623dadbd", + "created": "2018-12-13T13:12:06.140Z", + "updated": "2018-12-13T13:12:06.140Z", + "repo": "f583934a-e0d4-4892-ba00-938f1561c4e3", "hash": "42", "ref": "refs/heads/master", "message": "a", @@ -25,452 +25,450 @@ }, { "model": "documents.corpus", - "pk": "2b83fd3f-38bd-8fea-a8fe-dcefe907352f", + "pk": "18a7c751-c6f3-4868-a091-5fba65a40ab2", "fields": { - "name": "Himanis", + "name": "Unit Tests", "description": "", - "public": false + "public": true } }, { "model": "documents.corpus", - "pk": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", + "pk": "2b83fd3f-38bd-8fea-a8fe-dcefe907352f", "fields": { - "name": "Unit Tests", + "name": "Himanis", "description": "", - "public": true + "public": false } }, { "model": "documents.elementpath", - "pk": "0171a30a-65b2-4c79-adcd-a8a4ffd5f2bd", + "pk": "363166b6-b8c6-4925-8478-3fd9e0d632da", "fields": { - "element": "63852eb7-cd26-4835-9465-1d555006dfee", - "path": "[\"f472023b-e1dd-4e95-8bcf-e04be448b7e4\", \"ef909167-1309-471c-b386-dfcf294e2994\"]", + "element": "9414a28b-3dec-496f-9cd6-7ba192de6d41", + "path": "[\"208ce1b2-5066-4305-8fae-2281426e6e7a\", \"c0e82474-21bd-4c05-8dbc-83792d0d8b22\", \"228fbfbb-0229-472f-a768-1c84f1fcea84\"]", "ordering": 0 } }, { "model": "documents.elementpath", - "pk": "083a749f-3fd3-45f4-9b79-49cec7f15dde", + "pk": "3c095189-9b83-4bb1-bf6b-ae89c8c2ab65", "fields": { - "element": "c567a20d-5758-41d5-ad02-5c7224e3eaf1", - "path": "[\"f472023b-e1dd-4e95-8bcf-e04be448b7e4\", \"ef909167-1309-471c-b386-dfcf294e2994\"]", - "ordering": 4 + "element": "f7370aea-b745-42c0-8ba9-01dbd341aa65", + "path": "[\"208ce1b2-5066-4305-8fae-2281426e6e7a\", \"c0e82474-21bd-4c05-8dbc-83792d0d8b22\", \"79605cde-4454-48f1-b8dd-2e417c5b7c71\"]", + "ordering": 0 } }, { "model": "documents.elementpath", - "pk": "1940afd3-efd7-4a6e-bae8-9f56280f72f1", + "pk": "4b745347-6948-47a6-b60f-cd75671a69bd", "fields": { - "element": "edc36b74-42b8-4ecf-8f8d-979a8d801fb8", - "path": "[\"f472023b-e1dd-4e95-8bcf-e04be448b7e4\", \"ef909167-1309-471c-b386-dfcf294e2994\"]", - "ordering": 1 + "element": "88c93c74-72bc-4bfe-8a03-fa90dc55026b", + "path": "[\"208ce1b2-5066-4305-8fae-2281426e6e7a\", \"c0e82474-21bd-4c05-8dbc-83792d0d8b22\", \"e1e835db-ebf0-425b-b49b-230f47969d82\"]", + "ordering": 0 } }, { "model": "documents.elementpath", - "pk": "215af930-dc55-4091-9bf9-5a3291f05d94", + "pk": "54371686-780d-40b3-81c2-210eaf9570c4", "fields": { - "element": "e8750ede-fda5-4851-9100-0108efd23d84", - "path": "[\"f472023b-e1dd-4e95-8bcf-e04be448b7e4\", \"ef909167-1309-471c-b386-dfcf294e2994\", \"edc36b74-42b8-4ecf-8f8d-979a8d801fb8\"]", + "element": "228fbfbb-0229-472f-a768-1c84f1fcea84", + "path": "[\"208ce1b2-5066-4305-8fae-2281426e6e7a\", \"c0e82474-21bd-4c05-8dbc-83792d0d8b22\"]", "ordering": 0 } }, { "model": "documents.elementpath", - "pk": "493a65a8-b69a-45e6-97fe-29fefa6fba2a", + "pk": "5a43bf99-a028-48e0-9148-6cb7480bea50", "fields": { - "element": "da27cf43-c693-47e4-890d-7126c5374228", - "path": "[\"f472023b-e1dd-4e95-8bcf-e04be448b7e4\", \"ef909167-1309-471c-b386-dfcf294e2994\", \"f504186e-2752-4bce-a920-02f627f114e5\"]", - "ordering": 0 + "element": "79605cde-4454-48f1-b8dd-2e417c5b7c71", + "path": "[\"208ce1b2-5066-4305-8fae-2281426e6e7a\", \"c0e82474-21bd-4c05-8dbc-83792d0d8b22\"]", + "ordering": 3 } }, { "model": "documents.elementpath", - "pk": "49b27e0e-d317-481e-a35e-766404501d8f", + "pk": "5b045828-8f73-4f2a-a9ae-a74a31fcfe30", "fields": { - "element": "a057ed59-b585-483c-825d-90a49a7ef3ce", - "path": "[\"f472023b-e1dd-4e95-8bcf-e04be448b7e4\", \"ef909167-1309-471c-b386-dfcf294e2994\", \"d475e405-af95-4d65-9bbe-a703b405bc5a\"]", - "ordering": 0 + "element": "749315d5-dcdc-4573-a59b-f86fac963e8d", + "path": "[\"1d187b11-5235-4b6b-a78d-d24d2cfd4993\", \"fd9af487-f1d7-467a-8e58-d13ac06a7a9c\"]", + "ordering": 2 } }, { "model": "documents.elementpath", - "pk": "55427b5c-176e-4f2e-8732-b9e7be8c346b", + "pk": "66297f35-484f-4760-95df-f37be25c84df", "fields": { - "element": "37778940-4f3e-4505-b4f7-64f7ba648e93", - "path": "[\"f472023b-e1dd-4e95-8bcf-e04be448b7e4\", \"ef909167-1309-471c-b386-dfcf294e2994\", \"edc36b74-42b8-4ecf-8f8d-979a8d801fb8\"]", - "ordering": 1 + "element": "e1e835db-ebf0-425b-b49b-230f47969d82", + "path": "[\"208ce1b2-5066-4305-8fae-2281426e6e7a\", \"c0e82474-21bd-4c05-8dbc-83792d0d8b22\"]", + "ordering": 4 } }, { "model": "documents.elementpath", - "pk": "6ea9d923-c886-4c0c-b558-a8c0d189da81", + "pk": "6829616b-4241-44f1-a96f-9da27c140e4b", "fields": { - "element": "9ab4446a-770d-4cea-a745-72092eeea419", - "path": "[\"102c0ee1-ec85-43d4-97eb-eecdb238948b\"]", + "element": "c0e82474-21bd-4c05-8dbc-83792d0d8b22", + "path": "[\"208ce1b2-5066-4305-8fae-2281426e6e7a\"]", "ordering": 0 } }, { "model": "documents.elementpath", - "pk": "74596e98-6b2d-41c8-8c74-4c4e515718f9", + "pk": "70ac56fd-462f-45aa-ac05-fda27518f2bb", "fields": { - "element": "87bacf31-eb2a-44af-bd03-7e7d2fdbd4f9", - "path": "[\"102c0ee1-ec85-43d4-97eb-eecdb238948b\", \"9ab4446a-770d-4cea-a745-72092eeea419\"]", + "element": "496ce918-8d0f-40b7-8c94-f008187005e3", + "path": "[\"208ce1b2-5066-4305-8fae-2281426e6e7a\", \"c0e82474-21bd-4c05-8dbc-83792d0d8b22\", \"97b1945e-ec0d-4e79-830c-13c2a47fb6b3\"]", "ordering": 1 } }, { "model": "documents.elementpath", - "pk": "7e09b3dc-2c22-43d0-89f6-b7d630d8ea4a", + "pk": "89152fa7-7194-4013-a607-a01b8f35631e", "fields": { - "element": "7455bacc-70c5-47f3-97d1-881e1ea4b8a1", - "path": "[\"f472023b-e1dd-4e95-8bcf-e04be448b7e4\", \"ef909167-1309-471c-b386-dfcf294e2994\"]", + "element": "54f9cbfd-4827-42e2-9e85-7993bb4c3394", + "path": "[\"1d187b11-5235-4b6b-a78d-d24d2cfd4993\", \"fd9af487-f1d7-467a-8e58-d13ac06a7a9c\"]", "ordering": 1 } }, { "model": "documents.elementpath", - "pk": "7f6b6c3f-9a75-4638-ad6d-1b30c192c833", + "pk": "940fd926-e15b-4af7-97bc-8bd35f4ffd15", "fields": { - "element": "4d3c447e-59ec-4fb9-92be-b85fde751c2a", - "path": "[\"102c0ee1-ec85-43d4-97eb-eecdb238948b\", \"9ab4446a-770d-4cea-a745-72092eeea419\"]", - "ordering": 2 + "element": "97b1945e-ec0d-4e79-830c-13c2a47fb6b3", + "path": "[\"208ce1b2-5066-4305-8fae-2281426e6e7a\", \"c0e82474-21bd-4c05-8dbc-83792d0d8b22\"]", + "ordering": 1 } }, { "model": "documents.elementpath", - "pk": "9f47be97-9f20-4400-90ae-f02c450affb4", + "pk": "9a8639c4-dc76-4e21-817d-0ba16a9233cc", "fields": { - "element": "f504186e-2752-4bce-a920-02f627f114e5", - "path": "[\"f472023b-e1dd-4e95-8bcf-e04be448b7e4\", \"ef909167-1309-471c-b386-dfcf294e2994\"]", - "ordering": 3 + "element": "3b845ff7-2e8d-4474-bc31-fb3d88aef2e3", + "path": "[\"208ce1b2-5066-4305-8fae-2281426e6e7a\", \"c0e82474-21bd-4c05-8dbc-83792d0d8b22\"]", + "ordering": 0 } }, { "model": "documents.elementpath", - "pk": 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"baf01f87-c6a1-4a5b-b99f-cbcb50ddc892", + "pk": "c4cb4d0b-d439-495b-a566-c8f7a4a23184", "fields": { - "element": "d475e405-af95-4d65-9bbe-a703b405bc5a", - "path": "[\"f472023b-e1dd-4e95-8bcf-e04be448b7e4\", \"ef909167-1309-471c-b386-dfcf294e2994\"]", - "ordering": 0 + "element": "908c9195-dd36-4cd2-922b-ca3739d6c1ac", + "path": "[\"208ce1b2-5066-4305-8fae-2281426e6e7a\", \"c0e82474-21bd-4c05-8dbc-83792d0d8b22\"]", + "ordering": 2 } }, { "model": "documents.elementpath", - "pk": "bbf89d24-bcc0-4c7a-b0e9-39cee149c81b", + "pk": "e0be4a1f-0c1e-4182-9f55-13120e4b0a78", "fields": { - "element": "ef909167-1309-471c-b386-dfcf294e2994", - "path": "[\"f472023b-e1dd-4e95-8bcf-e04be448b7e4\"]", + "element": "fbb25189-30f2-465d-be6a-fd5205baecdc", + "path": "[\"208ce1b2-5066-4305-8fae-2281426e6e7a\", \"c0e82474-21bd-4c05-8dbc-83792d0d8b22\", \"97b1945e-ec0d-4e79-830c-13c2a47fb6b3\"]", "ordering": 0 } }, { "model": "documents.elementpath", - "pk": "d3673c22-cd00-4d0b-8029-be57becab5c7", + "pk": "e791628d-8940-470e-ae6c-8ae0a51fda8f", "fields": { - "element": "16b29884-0d89-42db-909d-90ce722a7289", - "path": "[\"f472023b-e1dd-4e95-8bcf-e04be448b7e4\", \"ef909167-1309-471c-b386-dfcf294e2994\", \"c567a20d-5758-41d5-ad02-5c7224e3eaf1\"]", - "ordering": 0 + "element": "9e0562ac-e8da-46a9-9a47-db682e2804e0", + "path": "[\"208ce1b2-5066-4305-8fae-2281426e6e7a\", \"c0e82474-21bd-4c05-8dbc-83792d0d8b22\"]", + "ordering": 1 } }, { "model": "documents.elementpath", - "pk": "d4fb3fb4-e6cd-4c29-bda1-4b7e9b0b6e86", + "pk": "f66c0999-b7ac-4c92-a42d-9f4665e91c86", "fields": { - "element": "de978f5d-fa8e-4432-986c-a449366b2c00", - "path": "[\"f472023b-e1dd-4e95-8bcf-e04be448b7e4\", \"ef909167-1309-471c-b386-dfcf294e2994\", \"f00dd856-fa05-4ba9-9fe8-fb52db0b8948\"]", + "element": "aeed628d-e046-4f73-b237-fe5192a168b5", + "path": "[\"1d187b11-5235-4b6b-a78d-d24d2cfd4993\", \"fd9af487-f1d7-467a-8e58-d13ac06a7a9c\"]", "ordering": 0 } }, { "model": "documents.elementpath", - "pk": "eb80d007-0db2-48cc-8c70-6fc847bd5760", + "pk": "fd0a748f-b16f-4516-8d80-1d2a8311776e", "fields": { - "element": "f00dd856-fa05-4ba9-9fe8-fb52db0b8948", - "path": "[\"f472023b-e1dd-4e95-8bcf-e04be448b7e4\", \"ef909167-1309-471c-b386-dfcf294e2994\"]", - "ordering": 2 + "element": "fd9af487-f1d7-467a-8e58-d13ac06a7a9c", + "path": "[\"1d187b11-5235-4b6b-a78d-d24d2cfd4993\"]", + "ordering": 0 } }, { "model": "documents.element", - "pk": "01872d5e-f65d-4cc6-b5de-ae21511b4491", + "pk": "1d187b11-5235-4b6b-a78d-d24d2cfd4993", "fields": { - "created": "2018-11-26T11:00:55.702Z", - "updated": "2018-11-26T11:00:55.702Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "page", - "name": "Volume 2, page 1r", - "zone": "3d1f0fef-cf35-4079-849d-e6eeca89f336" + "created": "2018-12-13T13:12:05.860Z", + "updated": "2018-12-13T13:12:05.860Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "volume", + "name": "Volume 2", + "zone": null } }, { "model": "documents.element", - "pk": "102c0ee1-ec85-43d4-97eb-eecdb238948b", + "pk": "208ce1b2-5066-4305-8fae-2281426e6e7a", "fields": { - "created": "2018-11-26T11:00:55.645Z", - "updated": "2018-11-26T11:00:55.645Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", + "created": "2018-12-13T13:12:05.856Z", + "updated": "2018-12-13T13:12:05.856Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", "type": "volume", - "name": "Volume 2", + "name": "Volume 1", "zone": null } }, { "model": "documents.element", - "pk": "16b29884-0d89-42db-909d-90ce722a7289", + "pk": "228fbfbb-0229-472f-a768-1c84f1fcea84", "fields": { - "created": "2018-11-26T11:00:55.829Z", - "updated": "2018-11-26T11:00:55.829Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "surface", - "name": "Surface F", - "zone": "30cb5867-260e-4ff2-82ca-0a0093486304" + "created": "2018-12-13T13:12:06.010Z", + "updated": "2018-12-13T13:12:06.010Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "act", + "name": "Act 1", + "zone": null } }, { "model": "documents.element", - "pk": "37778940-4f3e-4505-b4f7-64f7ba648e93", + "pk": "3b845ff7-2e8d-4474-bc31-fb3d88aef2e3", "fields": { - "created": "2018-11-26T11:00:55.822Z", - "updated": "2018-11-26T11:00:55.822Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "surface", - "name": "Surface C", - "zone": "a66a97e3-2cde-4ca3-9611-468fec642acd" + "created": "2018-12-13T13:12:05.892Z", + "updated": "2018-12-13T13:12:05.892Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "page", + "name": "Volume 1, page 1r", + "zone": "5c2da9f5-b595-4b9c-9a1f-cb9b00ef45c4" } }, { "model": "documents.element", - "pk": "4d3c447e-59ec-4fb9-92be-b85fde751c2a", + "pk": "496ce918-8d0f-40b7-8c94-f008187005e3", "fields": { - "created": "2018-11-26T11:00:55.708Z", - "updated": "2018-11-26T11:00:55.708Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "page", - "name": "Volume 2, page 2r", - "zone": "71217fca-d6b2-4b38-9dd9-d8406faa58ce" + "created": "2018-12-13T13:12:06.072Z", + "updated": "2018-12-13T13:12:06.072Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "surface", + "name": "Surface C", + "zone": "6904b67e-9767-4cc5-bfcd-a41f6dcd4414" } }, { "model": "documents.element", - "pk": "611ef649-4071-40f7-af8e-d494df4042ff", + "pk": "54f9cbfd-4827-42e2-9e85-7993bb4c3394", "fields": { - "created": "2018-11-26T11:00:55.674Z", - "updated": "2018-11-26T11:00:55.674Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", + "created": "2018-12-13T13:12:05.948Z", + "updated": "2018-12-13T13:12:05.948Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", "type": "page", - "name": "Volume 1, page 2r", - "zone": "42e6eb0d-eec9-4912-beeb-c8776e7fc6fd" + "name": "Volume 2, page 1v", + "zone": "4385070c-4050-4b23-9d35-fc68b4852a00" } }, { "model": "documents.element", - "pk": "63852eb7-cd26-4835-9465-1d555006dfee", + "pk": "749315d5-dcdc-4573-a59b-f86fac963e8d", "fields": { - "created": "2018-11-26T11:00:55.667Z", - "updated": "2018-11-26T11:00:55.667Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", + "created": "2018-12-13T13:12:05.951Z", + "updated": "2018-12-13T13:12:05.951Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", "type": "page", - "name": "Volume 1, page 1r", - "zone": "003cabfd-45ee-4c67-bcaa-954938933370" + "name": "Volume 2, page 2r", + "zone": "d0fba2e6-990c-40dc-a8d6-9f7a9a10fe91" } }, { "model": "documents.element", - "pk": "7455bacc-70c5-47f3-97d1-881e1ea4b8a1", + "pk": "79605cde-4454-48f1-b8dd-2e417c5b7c71", "fields": { - "created": "2018-11-26T11:00:55.670Z", - "updated": "2018-11-26T11:00:55.671Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "page", - "name": "Volume 1, page 1v", - "zone": "2c1f66e5-e043-4a92-96ce-ae271bf03f0f" + "created": "2018-12-13T13:12:06.020Z", + "updated": "2018-12-13T13:12:06.020Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "act", + "name": "Act 4", + "zone": null } }, { "model": "documents.element", - "pk": "87bacf31-eb2a-44af-bd03-7e7d2fdbd4f9", + "pk": "88c93c74-72bc-4bfe-8a03-fa90dc55026b", "fields": { - "created": "2018-11-26T11:00:55.705Z", - "updated": "2018-11-26T11:00:55.705Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "page", - "name": "Volume 2, page 1v", - "zone": "4e1577cb-d97a-4f69-833b-183622934772" + "created": "2018-12-13T13:12:06.079Z", + "updated": "2018-12-13T13:12:06.079Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "surface", + "name": "Surface F", + "zone": "c91f6381-e8a7-4eb7-9e8b-5c7ffc0ad13e" } }, { "model": "documents.element", - "pk": "9ab4446a-770d-4cea-a745-72092eeea419", + "pk": "908c9195-dd36-4cd2-922b-ca3739d6c1ac", "fields": { - "created": "2018-11-26T11:00:55.648Z", - "updated": "2018-11-26T11:00:55.648Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "register", - "name": "Register 2", + "created": "2018-12-13T13:12:06.016Z", + "updated": "2018-12-13T13:12:06.016Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "act", + "name": "Act 3", "zone": null } }, { "model": "documents.element", - "pk": "a057ed59-b585-483c-825d-90a49a7ef3ce", + "pk": "9414a28b-3dec-496f-9cd6-7ba192de6d41", "fields": { - "created": "2018-11-26T11:00:55.817Z", - "updated": "2018-11-26T11:00:55.817Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", + "created": "2018-12-13T13:12:06.067Z", + "updated": "2018-12-13T13:12:06.067Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", "type": "surface", "name": "Surface A", - "zone": "f8b4f99a-58de-4cf8-90f7-3311cb3c1a64" + "zone": "c5ec35a7-6780-4feb-8207-1299288a491c" } }, { "model": "documents.element", - "pk": "c567a20d-5758-41d5-ad02-5c7224e3eaf1", + "pk": "97b1945e-ec0d-4e79-830c-13c2a47fb6b3", "fields": { - "created": "2018-11-26T11:00:55.769Z", - "updated": "2018-11-26T11:00:55.769Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", + "created": "2018-12-13T13:12:06.013Z", + "updated": "2018-12-13T13:12:06.014Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", "type": "act", - "name": "Act 5", + "name": "Act 2", "zone": null } }, { "model": "documents.element", - "pk": "d475e405-af95-4d65-9bbe-a703b405bc5a", + "pk": "9e0562ac-e8da-46a9-9a47-db682e2804e0", "fields": { - "created": "2018-11-26T11:00:55.757Z", - "updated": "2018-11-26T11:00:55.757Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "act", - "name": "Act 1", - "zone": null + "created": "2018-12-13T13:12:05.903Z", + "updated": "2018-12-13T13:12:05.903Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "page", + "name": "Volume 1, page 1v", + "zone": "f9fd18ea-3ba4-43b6-b077-aaaa5cd1ac18" } }, { "model": "documents.element", - "pk": "da27cf43-c693-47e4-890d-7126c5374228", + "pk": "9f2ed948-0bfd-4f45-ba33-8047b44b7f0f", "fields": { - "created": "2018-11-26T11:00:55.827Z", - "updated": "2018-11-26T11:00:55.827Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "surface", - "name": "Surface E", - "zone": "e87f81eb-1005-40f8-9218-666747858eda" + "created": "2018-12-13T13:12:05.907Z", + "updated": "2018-12-13T13:12:05.907Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "page", + "name": "Volume 1, page 2r", + "zone": "940367d0-05ba-4bd0-81ed-4dd3ba0933e6" } }, { "model": "documents.element", - "pk": "de978f5d-fa8e-4432-986c-a449366b2c00", + "pk": "aeed628d-e046-4f73-b237-fe5192a168b5", "fields": { - "created": "2018-11-26T11:00:55.824Z", - "updated": "2018-11-26T11:00:55.824Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "surface", - "name": "Surface D", - "zone": "9b81dc02-3b88-4405-b341-be1b259b8a26" + "created": "2018-12-13T13:12:05.944Z", + "updated": "2018-12-13T13:12:05.944Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "page", + "name": "Volume 2, page 1r", + "zone": "319f9924-b6ac-442b-b7c3-ecea68b16b76" } }, { "model": "documents.element", - "pk": "e8750ede-fda5-4851-9100-0108efd23d84", + "pk": "c0e82474-21bd-4c05-8dbc-83792d0d8b22", "fields": { - "created": "2018-11-26T11:00:55.819Z", - "updated": "2018-11-26T11:00:55.819Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "surface", - "name": "Surface B", - "zone": "fef19cff-bd3a-4100-b101-4383bdebfc2d" + "created": "2018-12-13T13:12:05.861Z", + "updated": "2018-12-13T13:12:05.861Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "register", + "name": "Register 1", + "zone": null } }, { "model": "documents.element", - "pk": "edc36b74-42b8-4ecf-8f8d-979a8d801fb8", + "pk": "dcf882af-993a-4582-adfc-6109996a7dda", "fields": { - "created": "2018-11-26T11:00:55.760Z", - "updated": "2018-11-26T11:00:55.760Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "act", - "name": "Act 2", - "zone": null + "created": "2018-12-13T13:12:06.074Z", + "updated": "2018-12-13T13:12:06.074Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "surface", + "name": "Surface D", + "zone": "3d31945a-af6e-4328-acfc-0fa9e67a3f45" } }, { "model": "documents.element", - "pk": "ef909167-1309-471c-b386-dfcf294e2994", + "pk": "e1e835db-ebf0-425b-b49b-230f47969d82", "fields": { - "created": "2018-11-26T11:00:55.647Z", - "updated": "2018-11-26T11:00:55.647Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "register", - "name": "Register 1", + "created": "2018-12-13T13:12:06.023Z", + "updated": "2018-12-13T13:12:06.023Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "act", + "name": "Act 5", "zone": null } }, { "model": "documents.element", - "pk": "f00dd856-fa05-4ba9-9fe8-fb52db0b8948", + "pk": "f7370aea-b745-42c0-8ba9-01dbd341aa65", "fields": { - "created": "2018-11-26T11:00:55.764Z", - "updated": "2018-11-26T11:00:55.764Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "act", - "name": "Act 3", - "zone": null + "created": "2018-12-13T13:12:06.076Z", + "updated": "2018-12-13T13:12:06.077Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "surface", + "name": "Surface E", + "zone": "3f80f94a-2896-4c9e-a916-79bbe4bf4fb2" } }, { "model": "documents.element", - "pk": "f472023b-e1dd-4e95-8bcf-e04be448b7e4", + "pk": "fbb25189-30f2-465d-be6a-fd5205baecdc", "fields": { - "created": "2018-11-26T11:00:55.643Z", - "updated": "2018-11-26T11:00:55.643Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "volume", - "name": "Volume 1", - "zone": null + "created": "2018-12-13T13:12:06.069Z", + "updated": "2018-12-13T13:12:06.069Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "surface", + "name": "Surface B", + "zone": "9510d3e7-715d-4ab7-94af-d2a6db153a49" } }, { "model": "documents.element", - "pk": "f504186e-2752-4bce-a920-02f627f114e5", + "pk": "fd9af487-f1d7-467a-8e58-d13ac06a7a9c", "fields": { - "created": "2018-11-26T11:00:55.766Z", - "updated": "2018-11-26T11:00:55.766Z", - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", - "type": "act", - "name": "Act 4", + "created": "2018-12-13T13:12:05.862Z", + "updated": "2018-12-13T13:12:05.862Z", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", + "type": "register", + "name": "Register 2", "zone": null } }, { "model": "documents.page", - "pk": "01872d5e-f65d-4cc6-b5de-ae21511b4491", + "pk": "3b845ff7-2e8d-4474-bc31-fb3d88aef2e3", "fields": { "folio": "1r", - "classification": null, - "text": null, "page_type": "page", "nb": 1, "direction": "recto", @@ -479,24 +477,20 @@ }, { "model": "documents.page", - "pk": "4d3c447e-59ec-4fb9-92be-b85fde751c2a", + "pk": "54f9cbfd-4827-42e2-9e85-7993bb4c3394", "fields": { - "folio": "2r", - "classification": null, - "text": null, + "folio": "1v", "page_type": "page", - "nb": 2, - "direction": "recto", + "nb": 1, + "direction": "verso", "complement": null } }, { "model": "documents.page", - "pk": "611ef649-4071-40f7-af8e-d494df4042ff", + "pk": "749315d5-dcdc-4573-a59b-f86fac963e8d", "fields": { "folio": "2r", - "classification": null, - "text": null, "page_type": "page", "nb": 2, "direction": "recto", @@ -505,62 +499,64 @@ }, { "model": "documents.page", - "pk": "63852eb7-cd26-4835-9465-1d555006dfee", + "pk": "9e0562ac-e8da-46a9-9a47-db682e2804e0", "fields": { - "folio": "1r", - "classification": null, - "text": null, + "folio": "1v", "page_type": "page", "nb": 1, - "direction": "recto", + "direction": "verso", "complement": null } }, { "model": "documents.page", - "pk": "7455bacc-70c5-47f3-97d1-881e1ea4b8a1", + "pk": "9f2ed948-0bfd-4f45-ba33-8047b44b7f0f", "fields": { - "folio": "1v", - "classification": null, - "text": null, + "folio": "2r", "page_type": "page", - "nb": 1, - "direction": "verso", + "nb": 2, + "direction": "recto", "complement": null } }, { "model": "documents.page", - "pk": "87bacf31-eb2a-44af-bd03-7e7d2fdbd4f9", + "pk": "aeed628d-e046-4f73-b237-fe5192a168b5", "fields": { - "folio": "1v", - "classification": null, - "text": null, + "folio": "1r", "page_type": "page", "nb": 1, - "direction": "verso", + "direction": "recto", "complement": null } }, { "model": "documents.act", - "pk": "c567a20d-5758-41d5-ad02-5c7224e3eaf1", + "pk": "228fbfbb-0229-472f-a768-1c84f1fcea84", "fields": { - "number": "5", + "number": "1", + "folio": "1r" + } +}, +{ + "model": "documents.act", + "pk": "79605cde-4454-48f1-b8dd-2e417c5b7c71", + "fields": { + "number": "4", "folio": "2r" } }, { "model": "documents.act", - "pk": "d475e405-af95-4d65-9bbe-a703b405bc5a", + "pk": "908c9195-dd36-4cd2-922b-ca3739d6c1ac", "fields": { - "number": "1", - "folio": "1r" + "number": "3", + "folio": "2r" } }, { "model": "documents.act", - "pk": "edc36b74-42b8-4ecf-8f8d-979a8d801fb8", + "pk": "97b1945e-ec0d-4e79-830c-13c2a47fb6b3", "fields": { "number": "2", "folio": "1r-1v" @@ -568,115 +564,146 @@ }, { "model": "documents.act", - "pk": "f00dd856-fa05-4ba9-9fe8-fb52db0b8948", + "pk": "e1e835db-ebf0-425b-b49b-230f47969d82", "fields": { - "number": "3", + "number": "5", "folio": "2r" } }, { - "model": "documents.act", - "pk": "f504186e-2752-4bce-a920-02f627f114e5", + "model": "documents.datasource", + "pk": "269ade65-42b9-48fa-a0c4-eb1885007b15", "fields": { - "number": "4", - "folio": "2r" + "type": "classifier", + "slug": "tobacco", + "revision": "c0ffee", + "internal": true + } +}, +{ + "model": "documents.datasource", + "pk": "3ea7ba60-5809-485a-aa47-e40eb9ed5445", + "fields": { + "type": "recognizer", + "slug": "test", + "revision": "4.2", + "internal": false + } +}, +{ + "model": "documents.datasource", + "pk": "b51466cc-1965-4934-aaa1-4ef819f24553", + "fields": { + "type": "recognizer", + "slug": "valencia", + "revision": "2017", + "internal": false } }, { "model": "documents.transcription", - "pk": "37c45fbb-fb6c-4c80-8529-72d2c237f029", + "pk": "13b675ba-5147-4000-9de2-a951684048da", "fields": { - "element": "611ef649-4071-40f7-af8e-d494df4042ff", + "element": "3b845ff7-2e8d-4474-bc31-fb3d88aef2e3", "type": "word", - "zone": "e155400f-c67f-4594-bc0f-75140ba509ed", - "text": "PARIS", + "zone": 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"2018-11-26T11:00:55.299Z", - "updated": "2018-11-26T11:00:55.299Z" + "created": "2018-12-13T13:12:05.517Z", + "updated": "2018-12-13T13:12:05.517Z" } }, { "model": "images.image", - "pk": "09d5b990-8f87-4acc-bf5f-f27c20758e25", + "pk": "08bc1f8d-b1fd-44ee-8c74-67eb2430a99b", "fields": { - "created": "2018-11-26T11:00:55.308Z", - "updated": "2018-11-26T11:00:55.308Z", + "created": "2018-12-13T13:12:05.528Z", + "updated": "2018-12-13T13:12:05.528Z", "server": 1, - "path": "img2", + "path": "img6", "width": 1000, "height": 1000, "status": "unchecked" @@ -706,12 +733,12 @@ }, { "model": "images.image", - "pk": "0c2e4470-f214-4c65-b6ee-65e14e1c6d7b", + "pk": "31035ebe-74fc-46bf-b4be-fda720b52e92", "fields": { - "created": "2018-11-26T11:00:55.311Z", - "updated": "2018-11-26T11:00:55.311Z", + "created": "2018-12-13T13:12:05.520Z", + "updated": "2018-12-13T13:12:05.520Z", "server": 1, - "path": "img3", + "path": "img1", "width": 1000, "height": 1000, "status": "unchecked" @@ -719,12 +746,12 @@ }, { "model": "images.image", - "pk": "0d1cd42e-9a84-4890-ad1e-bff2ced9bbda", + "pk": "43fe4da8-3c92-45b0-bab2-771a1c8dd79d", "fields": { - "created": "2018-11-26T11:00:55.318Z", - "updated": "2018-11-26T11:00:55.318Z", + "created": "2018-12-13T13:12:05.525Z", + "updated": "2018-12-13T13:12:05.525Z", "server": 1, - "path": "img5", + "path": "img4", "width": 1000, "height": 1000, "status": "unchecked" @@ -732,12 +759,12 @@ }, { "model": "images.image", - "pk": "52c95086-bf90-4899-972b-f220d183e887", + "pk": "55ed7aee-5be5-429c-90d9-588bfa773204", "fields": { - "created": "2018-11-26T11:00:55.313Z", - "updated": "2018-11-26T11:00:55.313Z", + "created": "2018-12-13T13:12:05.527Z", + "updated": "2018-12-13T13:12:05.527Z", "server": 1, - "path": "img4", + "path": "img5", "width": 1000, "height": 1000, "status": "unchecked" @@ -745,12 +772,12 @@ }, { "model": "images.image", - "pk": "bb3dce0e-bce1-4abe-b5d7-a9130eb6751b", + "pk": "b8770987-4813-4379-b2db-029bea0615ff", "fields": { - "created": "2018-11-26T11:00:55.319Z", - "updated": "2018-11-26T11:00:55.319Z", + "created": "2018-12-13T13:12:05.523Z", + "updated": "2018-12-13T13:12:05.523Z", "server": 1, - "path": "img6", + "path": "img2", "width": 1000, "height": 1000, "status": "unchecked" @@ -758,12 +785,12 @@ }, { "model": "images.image", - "pk": "c50a04e4-508c-467c-914e-10dafb356d55", + "pk": "e9912e58-aaf8-4a0a-abbe-a34f61f0e640", "fields": { - "created": "2018-11-26T11:00:55.303Z", - "updated": "2018-11-26T11:00:55.303Z", + "created": "2018-12-13T13:12:05.524Z", + "updated": "2018-12-13T13:12:05.524Z", "server": 1, - "path": "img1", + "path": "img3", "width": 1000, "height": 1000, "status": "unchecked" @@ -771,219 +798,219 @@ }, { "model": "images.zone", - "pk": "003cabfd-45ee-4c67-bcaa-954938933370", + "pk": "12dd1879-9224-4000-bd82-16c8d98dfb8e", "fields": { - "created": "2018-11-26T11:00:55.326Z", - "updated": "2018-11-26T11:00:55.326Z", - "image": "c50a04e4-508c-467c-914e-10dafb356d55", - "polygon": 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"updated": "2018-11-26T11:00:55.820Z", - "image": "09d5b990-8f87-4acc-bf5f-f27c20758e25", - "polygon": "Polygon((0,0), (1000,0), (1000,1000), (0,1000), (0,0))" + "created": "2018-12-13T13:12:06.003Z", + "updated": "2018-12-13T13:12:06.003Z", + "image": "e9912e58-aaf8-4a0a-abbe-a34f61f0e640", + "polygon": "Polygon((400,400), (500,400), (500,500), (400,500), (400,400))" } }, { "model": "images.zone", - "pk": "bec25d74-44c0-4cee-bc4c-f7efaa5d9b06", + "pk": "c5ec35a7-6780-4feb-8207-1299288a491c", "fields": { - "created": "2018-11-26T11:00:55.738Z", - "updated": "2018-11-26T11:00:55.738Z", - "image": "c50a04e4-508c-467c-914e-10dafb356d55", - "polygon": "Polygon((700,700), (800,700), (800,800), (700,800), (700,700))" + "created": "2018-12-13T13:12:06.065Z", + "updated": "2018-12-13T13:12:06.065Z", + "image": "31035ebe-74fc-46bf-b4be-fda720b52e92", + "polygon": "Polygon((0,0), (600,0), (600,600), (0,600), (0,0))" } }, { "model": "images.zone", - "pk": "e155400f-c67f-4594-bc0f-75140ba509ed", + "pk": "c91f6381-e8a7-4eb7-9e8b-5c7ffc0ad13e", "fields": { - "created": "2018-11-26T11:00:55.748Z", - "updated": "2018-11-26T11:00:55.748Z", - "image": "0c2e4470-f214-4c65-b6ee-65e14e1c6d7b", - "polygon": "Polygon((100,100), (200,100), (200,200), (100,200), (100,100))" + "created": "2018-12-13T13:12:06.078Z", + "updated": "2018-12-13T13:12:06.078Z", + "image": "e9912e58-aaf8-4a0a-abbe-a34f61f0e640", + "polygon": "Polygon((600,600), (1000,600), (1000,1000), (600,1000), (600,600))" } }, { "model": "images.zone", - "pk": "e87f81eb-1005-40f8-9218-666747858eda", + "pk": "d0fba2e6-990c-40dc-a8d6-9f7a9a10fe91", "fields": { - "created": "2018-11-26T11:00:55.825Z", - "updated": "2018-11-26T11:00:55.825Z", - "image": "0c2e4470-f214-4c65-b6ee-65e14e1c6d7b", - "polygon": "Polygon((300,300), (600,300), (600,600), (300,600), (300,300))" + "created": "2018-12-13T13:12:05.537Z", + "updated": "2018-12-13T13:12:05.537Z", + "image": "08bc1f8d-b1fd-44ee-8c74-67eb2430a99b", + "polygon": "Polygon((0,0), (1000,0), (1000,1000), (0,1000), (0,0))" } }, { "model": "images.zone", - "pk": "f4562b07-8590-49f2-b353-79f56e0a3e13", + "pk": "d3d32855-8ab9-400f-bb8d-860c834dd055", "fields": { - "created": "2018-11-26T11:00:55.746Z", - "updated": "2018-11-26T11:00:55.746Z", - "image": "09d5b990-8f87-4acc-bf5f-f27c20758e25", + "created": "2018-12-13T13:12:06.006Z", + "updated": "2018-12-13T13:12:06.006Z", + "image": "e9912e58-aaf8-4a0a-abbe-a34f61f0e640", "polygon": "Polygon((700,700), (800,700), (800,800), (700,800), (700,700))" } }, { "model": "images.zone", - "pk": "f8b4f99a-58de-4cf8-90f7-3311cb3c1a64", + "pk": "f73e0a22-af4d-4c31-9ac9-20a63a086523", "fields": { - "created": "2018-11-26T11:00:55.815Z", - "updated": "2018-11-26T11:00:55.815Z", - "image": "c50a04e4-508c-467c-914e-10dafb356d55", - "polygon": "Polygon((0,0), (600,0), (600,600), (0,600), (0,0))" + "created": "2018-12-13T13:12:05.981Z", + "updated": "2018-12-13T13:12:05.981Z", + "image": "31035ebe-74fc-46bf-b4be-fda720b52e92", + "polygon": "Polygon((100,100), (200,100), (200,200), (100,200), (100,100))" } }, { "model": "images.zone", - "pk": "fb9bb707-0186-44b8-92a3-f61be201396b", + "pk": "f9fd18ea-3ba4-43b6-b077-aaaa5cd1ac18", "fields": { - "created": "2018-11-26T11:00:55.751Z", - "updated": "2018-11-26T11:00:55.751Z", - "image": "0c2e4470-f214-4c65-b6ee-65e14e1c6d7b", - "polygon": "Polygon((400,400), (500,400), (500,500), (400,500), (400,400))" + "created": "2018-12-13T13:12:05.532Z", + "updated": "2018-12-13T13:12:05.532Z", + "image": "b8770987-4813-4379-b2db-029bea0615ff", + "polygon": "Polygon((0,0), (1000,0), (1000,1000), (0,1000), (0,0))" } }, { "model": "images.zone", - "pk": "fef19cff-bd3a-4100-b101-4383bdebfc2d", + "pk": "fae811b1-c3b5-4fe7-9e32-77c226059c0f", "fields": { - "created": "2018-11-26T11:00:55.818Z", - "updated": "2018-11-26T11:00:55.818Z", - "image": "c50a04e4-508c-467c-914e-10dafb356d55", - "polygon": "Polygon((600,600), (1000,600), (1000,1000), (600,1000), (600,600))" + "created": "2018-12-13T13:12:05.997Z", + "updated": "2018-12-13T13:12:05.997Z", + "image": "b8770987-4813-4379-b2db-029bea0615ff", + "polygon": "Polygon((700,700), (800,700), (800,800), (700,800), (700,700))" } }, { "model": "users.user", "pk": 1, "fields": { - "password": "pbkdf2_sha256$120000$diXuSRTkqyMv$s7EQzaDde+qg4VFaPlFjR355ih7dJ2PFh1LruHrp2Ms=", + "password": "pbkdf2_sha256$120000$4CUuganwmwOr$EEkgtbT3fBNHIWstzwMmX5Knf5F4dd20b2A6XlZMD20=", "last_login": null, "email": "root@root.fr", "is_active": true, @@ -996,7 +1023,7 @@ "model": "users.user", "pk": 2, "fields": { - "password": "pbkdf2_sha256$120000$gOUXsvBSdkm4$dliHiRRChmIO6WOFZu/UpfSnz7C7DXdUtv59WLHGPfk=", + "password": "pbkdf2_sha256$120000$paQdGbzx19CI$S2acm3iY1p/pm0YlU2aM+asZTS8Go6JlbXZwmYyn7So=", "last_login": null, "email": "user@user.fr", "is_active": true, @@ -1007,7 +1034,7 @@ }, { "model": "users.oauthcredentials", - "pk": "675eaaa8-3152-4fe5-a891-fee8f9fbd56c", + "pk": "d7d2a36a-a87a-4180-8bf2-c827f01828b2", "fields": { "user": 2, "provider_name": "gitlab", @@ -1024,7 +1051,7 @@ "pk": 1, "fields": { "user": 2, - "corpus": "a0bea527-6005-4c43-a21d-8c137c7e1d2d", + "corpus": "18a7c751-c6f3-4868-a091-5fba65a40ab2", "can_write": true, "can_admin": true } diff --git a/arkindex/documents/management/commands/build_fixtures.py b/arkindex/documents/management/commands/build_fixtures.py index cb9ca114a2fea99fa334d48f29444996692ca9c4..1976fac79c3575b829fa71dfa904f3b5d2299cb3 100644 --- a/arkindex/documents/management/commands/build_fixtures.py +++ b/arkindex/documents/management/commands/build_fixtures.py @@ -1,7 +1,10 @@ #!/usr/bin/env python3 from django.core.management.base import BaseCommand -from arkindex.documents.models import \ - Corpus, Element, ElementType, Page, PageDirection, PageType, Act, Transcription, TranscriptionType +from arkindex_common.ml_tool import MLToolType +from arkindex.documents.models import ( + Corpus, Element, ElementType, Page, PageDirection, PageType, Act, + Transcription, TranscriptionType, DataSource +) from arkindex.images.models import ImageServer, Image, Zone from arkindex.users.models import User, CorpusRight @@ -40,6 +43,14 @@ class Command(BaseCommand): User.objects.create_superuser('root@root.fr', 'Pa$$w0rd') user = User.objects.create_user('user@user.fr', 'Pa$$w0rd') + # Create 1 data source for transcriptions + source = DataSource.objects.create( + type=MLToolType.Recognizer, + slug='test', + revision='4.2', + internal=False, + ) + # Create 1 corpus corpus = Corpus.objects.create(name='Unit Tests', public=True) @@ -88,6 +99,7 @@ class Command(BaseCommand): for word, pos in [("PARIS", 100), ("ROY", 400), ("DATUM", 700)]: Transcription.objects.create( element=page, + source=source, text=word, type=TranscriptionType.Word, zone=makezone(page.zone.image, pos, pos + 100), diff --git a/arkindex/documents/management/commands/from_csv.py b/arkindex/documents/management/commands/from_csv.py index f9d8c998a284a437f7f1cab093a0254afae2d58f..dd3f811f1f62f4a9efaf41986ba39cd855ade6ba 100644 --- a/arkindex/documents/management/commands/from_csv.py +++ b/arkindex/documents/management/commands/from_csv.py @@ -31,7 +31,12 @@ class Command(BaseCommand): parser.add_argument( '--corpus-id', required=True, - help='Slug of corpus to import volumes into' + help='ID of corpus to import volumes into' + ) + parser.add_argument( + '--source-id', + required=True, + help='ID of source to import index files into' ) parser.add_argument( '--col-name', @@ -75,6 +80,7 @@ class Command(BaseCommand): csv_data, options['index_root'], options['corpus_id'], + options['source_id'], col_name=options['col_name'], col_url=options['col_url'], col_path=options['col_path'], diff --git a/arkindex/documents/management/commands/import_annotations.py b/arkindex/documents/management/commands/import_annotations.py index f1042b5659c438ebb5d6c4a6617d3b4f3dea3029..334426aac3fa4d4ce539b0086db30f29246e1ac9 100644 --- a/arkindex/documents/management/commands/import_annotations.py +++ b/arkindex/documents/management/commands/import_annotations.py @@ -1,9 +1,10 @@ #!/usr/bin/env python3 from django.core.management.base import BaseCommand, CommandError from django.conf import settings +from arkindex_common.ml_tool import MLToolType from arkindex.project.tools import Timer from arkindex.images.importer import IndexImporter -from arkindex.documents.models import Element, ElementType, Corpus, Transcription +from arkindex.documents.models import Element, ElementType, Corpus, Transcription, DataSource from arkindex.documents.tasks import import_annotations import logging import datetime @@ -36,6 +37,11 @@ class Command(BaseCommand): help='ID or part of the name of the volume to import annotations in', required=True, ) + parser.add_argument( + '--source', + help='ID or part of the slug of a datasource to link annotations to', + required=True, + ) parser.add_argument( '--dry-run', help='Only show the associated images found for all index files, without importing anything' @@ -86,6 +92,12 @@ class Command(BaseCommand): except Exception: volume = Element.objects.get(name__icontains=options['volume'], type=ElementType.Volume, corpus=corpus) + # Find source + try: + source = DataSource.objects.get(pk=options['source'], type=MLToolType.Recognizer) + except Exception: + source = DataSource.objects.get(slug__icontains=options['source'], type=MLToolType.Recognizer) + # Handle mask if options['mask'] is not None and options['regex'] != IndexImporter.DEFAULT_MASK: raise CommandError('--mask and --regex cannot be used simultaneously.') @@ -100,7 +112,7 @@ class Command(BaseCommand): mask_regex = '^' + r'(.+)'.join(re.escape(p) for p in mask.split('<PATH>')) + '$' if not options['bench']: - self.start_import(options, volume, mask_regex) + self.start_import(options, volume, source, mask_regex) return # Log to file @@ -116,15 +128,15 @@ class Command(BaseCommand): Transcription.objects.filter(element__in=Element.objects.get_descending(volume.id)).delete() with Timer() as t: - self.start_import(options, volume, mask_regex) + self.start_import(options, volume, source, mask_regex) logger.info("Run #{}: {}".format(i + 1, t.delta)) - def start_import(self, options, volume, regex): + def start_import(self, options, volume, source, regex): if options['dry_run']: - importer = IndexImporter(options['index_folder'], volume, mask=regex) + importer = IndexImporter(options['index_folder'], volume, source, mask=regex) importer.dry_run() else: - sign = import_annotations.s(options['index_folder'], volume.id, mask=regex) + sign = import_annotations.s(options['index_folder'], volume.id, source.id, mask=regex) if options['sync'] or options['bench']: sign() else: diff --git a/arkindex/documents/migrations/0027_sources.py b/arkindex/documents/migrations/0027_sources.py new file mode 100644 index 0000000000000000000000000000000000000000..fc4d10b02162706c7a2fc317b3e6d6d599265be5 --- /dev/null +++ b/arkindex/documents/migrations/0027_sources.py @@ -0,0 +1,86 @@ +# Generated by Django 2.1 on 2018-12-12 15:42 + +from arkindex_common.ml_tool import MLToolType +from django.db import migrations, models +import django.db.models.deletion +import enumfields.fields +import uuid + + +def migrate_transcriptions(apps, schema_editor): + """ + Link existing transcriptions to Valencià 2017 + """ + DataSource = apps.get_model('documents', 'DataSource') + Transcription = apps.get_model('documents', 'Transcription') + + if not Transcription.objects.exists(): + return + + print('Adding Valencià source to transcriptions') + valencia = DataSource.objects.create( + type=MLToolType.Recognizer, + slug='valencia', + revision='2017', + internal=False, + ) + Transcription.objects.all().update(source=valencia) + print('Done') + + +class Migration(migrations.Migration): + + dependencies = [ + ('documents', '0026_corpus_description'), + ] + + operations = [ + # Create data sources + migrations.CreateModel( + name='DataSource', + fields=[ + ('id', models.UUIDField(default=uuid.uuid4, primary_key=True, serialize=False)), + ('type', enumfields.fields.EnumField(enum=MLToolType, max_length=10)), + ('slug', models.CharField(max_length=100)), + ('revision', models.CharField(max_length=100)), + ('internal', models.BooleanField()), + ], + ), + migrations.AlterUniqueTogether( + name='datasource', + unique_together={('type', 'slug', 'revision')}, + ), + + # Link data sources to transcriptions + migrations.AddField( + model_name='transcription', + name='source', + field=models.ForeignKey( + blank=True, + null=True, + on_delete=django.db.models.deletion.CASCADE, + related_name='transcriptions', + to='documents.DataSource', + ), + ), + + # Link existing transcriptions to Valencià + migrations.RunPython(migrate_transcriptions, reverse_code=migrations.RunPython.noop, elidable=True), + + # NOT NULL on source + migrations.AlterField( + model_name='transcription', + name='source', + field=models.ForeignKey( + on_delete=django.db.models.deletion.CASCADE, + related_name='transcriptions', + to='documents.DataSource', + ), + ), + + # Remove now useless page text field + migrations.RemoveField( + model_name='page', + name='text', + ), + ] diff --git a/arkindex/documents/migrations/0028_classifications.py b/arkindex/documents/migrations/0028_classifications.py new file mode 100644 index 0000000000000000000000000000000000000000..8fbbca8f4ebe674c1af87c49339b7f6ec7e98863 --- /dev/null +++ b/arkindex/documents/migrations/0028_classifications.py @@ -0,0 +1,101 @@ +# Generated by Django 2.1 on 2018-12-13 09:11 + +from django.db import migrations, models +from arkindex_common.ml_tool import MLToolType +import uuid + + +def migrate_classifications(apps, schema_editor): + """ + Create classifications from the JSONField + """ + DataSource = apps.get_model('documents', 'DataSource') + Page = apps.get_model('documents', 'Page') + Classification = apps.get_model('documents', 'Classification') + + pages = Page.objects.filter(classification__isnull=False) + if not pages.exists(): + return + + tobacco = DataSource.objects.create( + type=MLToolType.Classifier, + slug='tobacco', + revision='c0ffee', + internal=True, + ) + + print('Preparing classification instances') + classifications = [] + for page in pages.only('id', 'classification'): + data = page.classification + if isinstance(data, dict): + data = [data] + classifications.extend([ + Classification( + page=page, + source=tobacco, + class_name=cl['label'], + confidence=cl['probability'], + ) + for cl in data + if isinstance(cl, dict) + ]) + + print('Creating classifications') + Classification.objects.bulk_create(classifications) + print('Done') + + +class Migration(migrations.Migration): + + dependencies = [ + ('documents', '0027_sources'), + ] + + operations = [ + # Create classification model + migrations.CreateModel( + name='Classification', + fields=[ + ('id', models.UUIDField(default=uuid.uuid4, primary_key=True, serialize=False)), + ('class_name', models.CharField(max_length=100)), + ('confidence', models.FloatField(blank=True, null=True)), + ('page', models.ForeignKey( + on_delete=models.deletion.CASCADE, + related_name='classifications', + to='documents.Page', + )), + ('source', models.ForeignKey( + blank=True, + null=True, + on_delete=models.deletion.CASCADE, + related_name='classifications', + to='documents.DataSource', + )), + ], + ), + migrations.AlterUniqueTogether( + name='classification', + unique_together={('page', 'source', 'class_name')}, + ), + + # Create classifications from Page.classification JSONField + migrations.RunPython(migrate_classifications, elidable=True), + + # NOT NULL on source + migrations.AlterField( + model_name='classification', + name='source', + field=models.ForeignKey( + on_delete=models.deletion.CASCADE, + related_name='classifications', + to='documents.DataSource', + ), + ), + + # Remove now useless JSONField + migrations.RemoveField( + model_name='page', + name='classification', + ), + ] diff --git a/arkindex/documents/models.py b/arkindex/documents/models.py index bd4adfc0d79fcb1d91c3c14eb3a4326d4fdcd2b2..7f75e898da4360182312a02f30e2e361d8a9c9b6 100644 --- a/arkindex/documents/models.py +++ b/arkindex/documents/models.py @@ -1,8 +1,8 @@ from django.db import models, transaction from django.contrib.postgres.indexes import GinIndex -from django.contrib.postgres.fields import JSONField from django.utils.functional import cached_property from enumfields import EnumField, Enum +from arkindex_common.ml_tool import MLToolType from arkindex.project.models import IndexableModel from arkindex.project.fields import ArrayField from arkindex.documents.managers import ElementManager, CorpusManager @@ -279,10 +279,6 @@ class Page(Element): folio = models.CharField(max_length=250) - # Machine learning classes - classification = JSONField(null=True, blank=True) - text = models.TextField(null=True, blank=True) - # Parsed folio page_type = EnumField(PageType, max_length=50, null=True, blank=True) nb = models.PositiveIntegerField(null=True, blank=True) @@ -397,14 +393,19 @@ class Page(Element): ] } - def build_text(self): - self.text = '\n'.join( - t.text - for t in sorted( - self.transcriptions.filter(type=TranscriptionType.Line).prefetch_related('zone'), - key=lambda t: (t.zone.polygon.center.y, t.zone.polygon.center.x), - ) - ) + @property + def page_transcriptions(self): + """ + A helper property to write a serializer than only uses Page transcriptions + """ + return self.transcriptions.filter(type=TranscriptionType.Page) + + @property + def best_classes(self): + """ + The three most probable classifications + """ + return self.classifications.order_by('-confidence')[:3] class Act(Element): @@ -448,7 +449,30 @@ class Act(Element): } +class DataSource(models.Model): + id = models.UUIDField(primary_key=True, default=uuid.uuid4) + type = EnumField(MLToolType) + slug = models.CharField(max_length=100) + revision = models.CharField(max_length=100) + internal = models.BooleanField() + + class Meta: + unique_together = ( + ('type', 'slug', 'revision'), + ) + + @staticmethod + def from_ml_tool(ml_tool): + return DataSource.objects.get_or_create( + type=ml_tool.type, + slug=ml_tool.slug, + revision=str(ml_tool.version), + internal=True, + )[0] + + class TranscriptionType(Enum): + Page = 'page' Paragraph = 'paragraph' Line = 'line' Word = 'word' @@ -481,12 +505,17 @@ class Transcription(models.Model): null=True, blank=True, ) + source = models.ForeignKey( + DataSource, + on_delete=models.CASCADE, + related_name='transcriptions', + ) text = models.TextField(null=True, blank=True) score = models.FloatField(null=True, blank=True) class Meta: - # This index is manually created in a migration to - # support the md5(text) operation + # The following index was attempted with md5(text) in a manual migration + # but it causes too many performance issues. # unique_together = ( # ('element', 'zone', 'text') # ) @@ -508,6 +537,30 @@ class Transcription(models.Model): } +class Classification(models.Model): + """ + A result of a classifier on a page + """ + id = models.UUIDField(default=uuid.uuid4, primary_key=True) + page = models.ForeignKey( + Page, + on_delete=models.CASCADE, + related_name='classifications', + ) + source = models.ForeignKey( + DataSource, + on_delete=models.CASCADE, + related_name='classifications', + ) + class_name = models.CharField(max_length=100) + confidence = models.FloatField(null=True, blank=True) + + class Meta: + unique_together = ( + ('page', 'source', 'class_name'), + ) + + class MetaType(Enum): Text = 'text' HTML = 'html' diff --git a/arkindex/documents/search.py b/arkindex/documents/search.py index 19369d8265fc47c949654833a8a3ed1a9fb02c6c..ea42b86a574ba31b576d2d48eb1bbb6ca59d6a5e 100644 --- a/arkindex/documents/search.py +++ b/arkindex/documents/search.py @@ -13,7 +13,7 @@ def search_transcriptions_post(data): ts = Transcription.objects \ .filter(id__in=transcription_ids) \ .order_by('-score') \ - .prefetch_related('zone__image__server', 'element') + .prefetch_related('zone__image__server', 'element', 'source') # Recompute in case some transcriptions are not found in Postgres transcription_ids = [t.element_id for t in ts] all_parent_paths = Element.objects.get_ascendings_paths(*transcription_ids) diff --git a/arkindex/documents/serializers/elements.py b/arkindex/documents/serializers/elements.py index 3520fb6bcb619abef85b0075ef02c98c78aff6b9..9ec1fbc4aaa182008cf2671a4a69be4ef96f1eca 100644 --- a/arkindex/documents/serializers/elements.py +++ b/arkindex/documents/serializers/elements.py @@ -3,6 +3,8 @@ from arkindex.documents.models import \ Element, ElementType, Page, PageType, PageDirection, Act, Corpus, MetaData, MetaType from arkindex.images.serializers import ZoneSerializer, ImageSerializer from arkindex.documents.serializers.light import ElementLightSerializer, CorpusLightSerializer +from arkindex.documents.serializers.transcriptions import TranscriptionSerializer +from arkindex.documents.serializers.ml import ClassificationSerializer from arkindex.dataimport.serializers import RevisionSerializer from arkindex.dataimport.models import EventType from arkindex.project.serializer_fields import EnumField @@ -37,12 +39,18 @@ class PageSerializer(serializers.ModelSerializer): parents = serializers.ListField( child=serializers.ListField( - child=ElementLightSerializer() + child=ElementLightSerializer(), ), source='parent_elements', read_only=True, ) + transcriptions = TranscriptionSerializer( + source='page_transcriptions', + many=True, + ) + classifications = ClassificationSerializer(many=True) + class Meta: model = Page fields = ( @@ -52,10 +60,10 @@ class PageSerializer(serializers.ModelSerializer): 'direction', 'display_name', 'image', - 'classification', - 'text', 'corpus', 'parents', + 'transcriptions', + 'classifications', ) diff --git a/arkindex/documents/serializers/light.py b/arkindex/documents/serializers/light.py index f6eec20ccdea0cf539c0f5ed9824649dd1aadb0f..385bcbeb4b3be7c02b1d67d364758d719a6a08ba 100644 --- a/arkindex/documents/serializers/light.py +++ b/arkindex/documents/serializers/light.py @@ -1,5 +1,6 @@ from rest_framework import serializers from arkindex.documents.models import Element, ElementType, Corpus, Page, PageType, PageDirection +from arkindex.documents.serializers.ml import ClassificationSerializer from arkindex.images.serializers import ImageSerializer from arkindex.project.serializer_fields import EnumField @@ -26,16 +27,7 @@ class PageLightSerializer(serializers.ModelSerializer): page_type = EnumField(PageType) direction = EnumField(PageDirection) image = ImageSerializer(source='zone.image') - best_classes = serializers.SerializerMethodField() - - def get_best_classes(self, obj): - if not obj.classification: - return [] - return sorted( - obj.classification, - key=lambda c: c['probability'], - reverse=True, - )[:3] + best_classes = ClassificationSerializer(many=True) class Meta: model = Page diff --git a/arkindex/documents/serializers/ml.py b/arkindex/documents/serializers/ml.py new file mode 100644 index 0000000000000000000000000000000000000000..5d31dae36b01eef68da8b3a113a81fc812522c59 --- /dev/null +++ b/arkindex/documents/serializers/ml.py @@ -0,0 +1,38 @@ +from rest_framework import serializers +from arkindex_common.ml_tool import MLToolType +from arkindex.project.serializer_fields import EnumField +from arkindex.documents.models import DataSource, Classification + + +class DataSourceSerializer(serializers.ModelSerializer): + """ + Serialize a data source for transcriptions and classifications + """ + + type = EnumField(MLToolType) + + class Meta: + model = DataSource + fields = ( + 'id', + 'type', + 'slug', + 'revision', + 'internal', + ) + + +class ClassificationSerializer(serializers.ModelSerializer): + """ + Serialize a classification on a Page + """ + + source = DataSourceSerializer() + + class Meta: + model = Classification + fields = ( + 'source', + 'class_name', + 'confidence', + ) diff --git a/arkindex/documents/serializers/transcriptions.py b/arkindex/documents/serializers/transcriptions.py index 8fb42db8ef2022cea642b7542f034279cc1c01dc..af4af07a044c7e736702f4d7a74adb0a99fe0b05 100644 --- a/arkindex/documents/serializers/transcriptions.py +++ b/arkindex/documents/serializers/transcriptions.py @@ -1,5 +1,7 @@ from rest_framework import serializers -from arkindex.documents.models import Element, Transcription, TranscriptionType, Corpus +from arkindex_common.ml_tool import MLToolType +from arkindex.documents.models import Element, Transcription, TranscriptionType, Corpus, DataSource +from arkindex.documents.serializers.ml import DataSourceSerializer from arkindex.images.models import Image from arkindex.images.serializers import ZoneSerializer from arkindex.project.serializer_fields import EnumField @@ -13,6 +15,7 @@ class TranscriptionSerializer(serializers.ModelSerializer): type = EnumField(TranscriptionType) zone = ZoneSerializer() + source = DataSourceSerializer() class Meta: model = Transcription @@ -22,6 +25,7 @@ class TranscriptionSerializer(serializers.ModelSerializer): 'text', 'score', 'zone', + 'source', ) @@ -30,6 +34,7 @@ class TranscriptionCreateSerializer(serializers.Serializer): Allows for insertion of new transcriptions and zones """ element = serializers.PrimaryKeyRelatedField(queryset=Element.objects.all()) + source = serializers.PrimaryKeyRelatedField(queryset=DataSource.objects.filter(type=MLToolType.Recognizer)) polygon = serializers.ListField( child=serializers.ListField( child=serializers.IntegerField(), @@ -77,6 +82,7 @@ class TranscriptionsSerializer(serializers.Serializer): transcriptions = TranscriptionBulkSerializer(many=True) parent = serializers.PrimaryKeyRelatedField(queryset=Element.objects.all()) image = serializers.PrimaryKeyRelatedField(queryset=Image.objects.all()) + source = serializers.PrimaryKeyRelatedField(queryset=DataSource.objects.filter(type=MLToolType.Recognizer)) def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) diff --git a/arkindex/documents/tasks.py b/arkindex/documents/tasks.py index 7c99ec4c19515e2e3a438d042d053cbccaa86277..2040edf1c12b4dd92d414a6ea2f741a9c4eab017 100644 --- a/arkindex/documents/tasks.py +++ b/arkindex/documents/tasks.py @@ -2,7 +2,8 @@ from celery import shared_task, group, chain from celery_once import QueueOnce from celery.utils.log import get_task_logger from django.conf import settings -from arkindex.documents.models import Element, Act, Transcription, Page, ElementType +from arkindex_common.ml_tool import MLToolType +from arkindex.documents.models import Element, Act, Transcription, Page, ElementType, DataSource from arkindex.documents.indexer import Indexer from arkindex.documents.surface import SurfaceImporter from arkindex.documents.surface_link import SurfaceLinker @@ -74,16 +75,17 @@ def import_manifest(*args, **kwargs): @shared_task -def import_annotations(path, volume_id, mask=IndexImporter.DEFAULT_MASK): +def import_annotations(path, volume_id, source_id, mask=IndexImporter.DEFAULT_MASK): """ Import annotations from .idx.gz files into a volume """ volume = Element.objects.get(id=volume_id, type=ElementType.Volume) - IndexImporter(path, volume, mask=mask).run() + source = DataSource.objects.get(id=source_id, type=MLToolType.Recognizer) + IndexImporter(path, volume, source, mask=mask).run() @shared_task -def import_annotations_csv(name, raw_path, source, index_root): +def import_annotations_csv(name, raw_path, source, datasource_id, index_root): """ Import annotations from a CSV line """ @@ -95,22 +97,24 @@ def import_annotations_csv(name, raw_path, source, index_root): 'Index files path not found for volume {} : {}'.format(name, index_path) volume = Element.objects.get(name=name, type=ElementType.Volume) + datasource = DataSource.objects.get(id=datasource_id, type=MLToolType.Recognizer) if source == 'bvmm': logger.info("Importing BVMM annotations for volume {}".format(name)) - importer = IndexImporter(index_path, volume, mask=r'(?:.*/)?([^/]+)_[A-Z]\.idx\.gz') + importer = IndexImporter(index_path, volume, datasource, mask=r'(?:.*/)?([^/]+)_[A-Z]\.idx\.gz') elif source == 'gallica': logger.info("Importing Gallica annotations for volume {}".format(name)) - importer = GallicaIndexImporter(index_path, volume) + importer = GallicaIndexImporter(index_path, volume, datasource) else: # Try anyway logger.info("Importing unknown annotations for volume {}".format(name)) - importer = IndexImporter(index_path, volume) + importer = IndexImporter(index_path, volume, datasource) importer.run() @shared_task -def import_manifests_annotations(csv_data, index_root, corpus_id, col_name=0, col_url=1, col_path=2, col_source=3): +def import_manifests_annotations(csv_data, index_root, corpus_id, datasource_id, + col_name=0, col_url=1, col_path=2, col_source=3): ''' Import both manifests & annotations from a parsed csv file (or whatever table) @@ -121,7 +125,13 @@ def import_manifests_annotations(csv_data, index_root, corpus_id, col_name=0, co for row in csv_data ] annotations = [ - import_annotations_csv.si(row[col_name], row[col_path], row[col_source], index_root=index_root) + import_annotations_csv.si( + row[col_name], + row[col_path], + row[col_source], + index_root=index_root, + datasource_id=datasource_id, + ) for row in csv_data ] diff --git a/arkindex/documents/tests/commands/test_import_annotations.py b/arkindex/documents/tests/commands/test_import_annotations.py index a5ecf327c34b4f4d14a2394d0efe16ff4f298f65..24615059839d7e146346cda273f5b9087457b11e 100644 --- a/arkindex/documents/tests/commands/test_import_annotations.py +++ b/arkindex/documents/tests/commands/test_import_annotations.py @@ -2,7 +2,7 @@ from django.core.management import call_command from django.core.management.base import CommandError from unittest.mock import patch from arkindex.project.tests import FixtureTestCase -from arkindex.documents.models import Element, ElementType +from arkindex.documents.models import Element, ElementType, DataSource class TestImportAnnotationsCommand(FixtureTestCase): @@ -14,6 +14,7 @@ class TestImportAnnotationsCommand(FixtureTestCase): def setUpTestData(cls): super().setUpTestData() cls.vol = Element.objects.get(type=ElementType.Volume, name="Volume 1") + cls.source = DataSource.objects.get(slug='test') def setUp(self): super().setUp() @@ -31,10 +32,16 @@ class TestImportAnnotationsCommand(FixtureTestCase): """ Test import_annotations starts a Celery task """ - call_command('import_annotations', 'somefolder', corpus=str(self.corpus.id), volume=str(self.vol.id)) + call_command( + 'import_annotations', + 'somefolder', + corpus=str(self.corpus.id), + volume=str(self.vol.id), + source=str(self.source.id), + ) self.assertEqual(self.import_task_mock.s.return_value.delay.call_count, 1) args, kwargs = self.import_task_mock.s.call_args - self.assertTupleEqual(args, ('somefolder', self.vol.id)) + self.assertTupleEqual(args, ('somefolder', self.vol.id, self.source.id)) self.assertDictEqual(kwargs, {'mask': self.importer_mock.DEFAULT_MASK}) def test_dry_run(self): @@ -46,13 +53,14 @@ class TestImportAnnotationsCommand(FixtureTestCase): 'somefolder', corpus=str(self.corpus.id), volume=str(self.vol.id), + source=str(self.source.id), dry_run=True, ) self.assertEqual(self.import_task_mock.s.return_value.delay.call_count, 0) self.assertEqual(self.importer_mock.call_count, 1) args, kwargs = self.importer_mock.call_args - self.assertTupleEqual(args, ('somefolder', self.vol)) + self.assertTupleEqual(args, ('somefolder', self.vol, self.source)) self.assertDictEqual(kwargs, {'mask': self.importer_mock.DEFAULT_MASK}) self.assertEqual(self.importer_mock().dry_run.call_count, 1) @@ -66,6 +74,7 @@ class TestImportAnnotationsCommand(FixtureTestCase): 'somefolder', corpus=str(self.corpus.id), volume=str(self.vol.id), + source=str(self.source.id), sync=True, ) self.assertEqual(self.import_task_mock.s.call_count, 1) @@ -73,7 +82,7 @@ class TestImportAnnotationsCommand(FixtureTestCase): self.assertEqual(self.import_task_mock.s.return_value.delay.call_count, 0) args, kwargs = self.import_task_mock.s.call_args - self.assertTupleEqual(args, ('somefolder', self.vol.id)) + self.assertTupleEqual(args, ('somefolder', self.vol.id, self.source.id)) self.assertDictEqual(kwargs, {'mask': self.importer_mock.DEFAULT_MASK}) def test_benchmark(self): @@ -85,13 +94,14 @@ class TestImportAnnotationsCommand(FixtureTestCase): 'somefolder', corpus=str(self.corpus.id), volume=str(self.vol.id), + source=str(self.source.id), bench=3, ) self.assertEqual(self.import_task_mock.s.return_value.call_count, 3) self.assertEqual(self.import_task_mock.s.return_value.delay.call_count, 0) args, kwargs = self.import_task_mock.s.call_args - self.assertTupleEqual(args, ('somefolder', self.vol.id)) + self.assertTupleEqual(args, ('somefolder', self.vol.id, self.source.id)) self.assertDictEqual(kwargs, {'mask': self.importer_mock.DEFAULT_MASK}) @patch('arkindex.documents.management.commands.import_annotations.logging.getLogger') @@ -104,6 +114,7 @@ class TestImportAnnotationsCommand(FixtureTestCase): 'somefolder', corpus=str(self.corpus.id), volume=str(self.vol.id), + source=str(self.source.id), verbosity=1, ) self.assertFalse(getlogger().setLevel.called) @@ -113,6 +124,7 @@ class TestImportAnnotationsCommand(FixtureTestCase): 'somefolder', corpus=str(self.corpus.id), volume=str(self.vol.id), + source=str(self.source.id), verbosity=2, ) self.assertTrue(getlogger().setLevel.called) @@ -121,20 +133,48 @@ class TestImportAnnotationsCommand(FixtureTestCase): """ Test import_annotations can look for a volume by case-insensitive name """ - call_command('import_annotations', 'somefolder', corpus=str(self.corpus.id), volume='volume 1') + call_command( + 'import_annotations', + 'somefolder', + corpus=str(self.corpus.id), + volume='volume 1', + source=str(self.source.id), + ) self.assertEqual(self.import_task_mock.s.return_value.delay.call_count, 1) args, kwargs = self.import_task_mock.s.call_args - self.assertTupleEqual(args, ('somefolder', self.vol.id)) + self.assertTupleEqual(args, ('somefolder', self.vol.id, self.source.id)) self.assertDictEqual(kwargs, {'mask': self.importer_mock.DEFAULT_MASK}) def test_corpus_name(self): """ Test import_annotations can look for a corpus by case-insensitive name """ - call_command('import_annotations', 'somefolder', corpus='tests', volume=str(self.vol.id)) + call_command( + 'import_annotations', + 'somefolder', + corpus='tests', + volume=str(self.vol.id), + source=str(self.source.id), + ) + self.assertEqual(self.import_task_mock.s.return_value.delay.call_count, 1) + args, kwargs = self.import_task_mock.s.call_args + self.assertTupleEqual(args, ('somefolder', self.vol.id, self.source.id)) + self.assertDictEqual(kwargs, {'mask': self.importer_mock.DEFAULT_MASK}) + + def test_source_slug(self): + """ + Test import_annotations can look for a source by case-insensitive slug + """ + call_command( + 'import_annotations', + 'somefolder', + corpus='tests', + volume=str(self.vol.id), + source='Test', + ) self.assertEqual(self.import_task_mock.s.return_value.delay.call_count, 1) args, kwargs = self.import_task_mock.s.call_args - self.assertTupleEqual(args, ('somefolder', self.vol.id)) + self.assertTupleEqual(args, ('somefolder', self.vol.id, self.source.id)) self.assertDictEqual(kwargs, {'mask': self.importer_mock.DEFAULT_MASK}) def test_regex(self): @@ -146,11 +186,12 @@ class TestImportAnnotationsCommand(FixtureTestCase): 'somefolder', corpus=str(self.corpus.id), volume=str(self.vol.id), + source=str(self.source.id), regex='some_regex', ) self.assertEqual(self.import_task_mock.s.return_value.delay.call_count, 1) args, kwargs = self.import_task_mock.s.call_args - self.assertTupleEqual(args, ('somefolder', self.vol.id)) + self.assertTupleEqual(args, ('somefolder', self.vol.id, self.source.id)) self.assertDictEqual(kwargs, {'mask': 'some_regex'}) def test_mask(self): @@ -162,11 +203,12 @@ class TestImportAnnotationsCommand(FixtureTestCase): 'somefolder', corpus=str(self.corpus.id), volume=str(self.vol.id), + source=str(self.source.id), mask='something<PATH>otherthing', ) self.assertEqual(self.import_task_mock.s.return_value.delay.call_count, 1) args, kwargs = self.import_task_mock.s.call_args - self.assertTupleEqual(args, ('somefolder', self.vol.id)) + self.assertTupleEqual(args, ('somefolder', self.vol.id, self.source.id)) self.assertDictEqual(kwargs, {'mask': r'^something(.+)otherthing$'}) def test_invalid_mask(self): @@ -180,6 +222,7 @@ class TestImportAnnotationsCommand(FixtureTestCase): 'somefolder', corpus=str(self.corpus.id), volume=str(self.vol.id), + source=str(self.source.id), mask='some_invalid_mask', ) @@ -194,6 +237,7 @@ class TestImportAnnotationsCommand(FixtureTestCase): 'somefolder', corpus=str(self.corpus.id), volume=str(self.vol.id), + source=str(self.source.id), mask='some_mask', regex='some_regex', ) diff --git a/arkindex/documents/tests/test_page.py b/arkindex/documents/tests/test_page.py deleted file mode 100644 index ebb16a2767bf2a5039a0693784e2a3b1b9e5a265..0000000000000000000000000000000000000000 --- a/arkindex/documents/tests/test_page.py +++ /dev/null @@ -1,42 +0,0 @@ -from arkindex.project.tests import FixtureTestCase -from arkindex.project.polygon import Polygon -from arkindex.documents.models import Page, TranscriptionType - - -class TestPage(FixtureTestCase): - - def test_build_text(self): - img = self.imgsrv.images.create(path='build_text_test') - page = Page.objects.create( - corpus=self.corpus, - name='Page text test', - zone=img.zones.create( - polygon=Polygon.from_coords(0, 0, 1000, 1000), - ), - ) - # Two lines next to each other - page.transcriptions.create( - type=TranscriptionType.Line, - zone=img.zones.create(polygon=Polygon.from_coords(0, 0, 500, 100)), - text='Ligne 1', - ) - page.transcriptions.create( - type=TranscriptionType.Line, - zone=img.zones.create(polygon=Polygon.from_coords(600, 0, 100, 100)), - text='Ligne 2', - ) - # One line under them - page.transcriptions.create( - type=TranscriptionType.Line, - zone=img.zones.create(polygon=Polygon.from_coords(0, 200, 42, 42)), - text='Ligne 3', - ) - # A word that should not appear - page.transcriptions.create( - type=TranscriptionType.Word, - zone=img.zones.create(polygon=Polygon.from_coords(0, 0, 42, 42)), - text='Mot', - ) - - page.build_text() - self.assertEqual(page.text, "Ligne 1\nLigne 2\nLigne 3") diff --git a/arkindex/documents/tests/test_transcription_create.py b/arkindex/documents/tests/test_transcription_create.py index 83f98b7f0fa29a667a7e9828abb16884fcbd8835..5b33d373a24b55e603b0b588e8cf513e4ac494c4 100644 --- a/arkindex/documents/tests/test_transcription_create.py +++ b/arkindex/documents/tests/test_transcription_create.py @@ -3,7 +3,7 @@ from unittest.mock import patch from rest_framework import status from arkindex.project.tests import FixtureAPITestCase from arkindex.project.polygon import Polygon -from arkindex.documents.models import Page, Transcription, TranscriptionType +from arkindex.documents.models import Page, Transcription, TranscriptionType, DataSource import uuid @@ -12,8 +12,11 @@ class TestTranscriptionCreate(FixtureAPITestCase): Tests for text element creation view """ - def setUp(self): - self.page = Page.objects.get(corpus=self.corpus, zone__image__path='img1') + @classmethod + def setUpTestData(cls): + super().setUpTestData() + cls.page = Page.objects.get(corpus=cls.corpus, zone__image__path='img1') + cls.src = DataSource.objects.get(slug='test') def test_require_login(self): response = self.client.post(reverse('api:transcription-create'), format='json') @@ -28,6 +31,7 @@ class TestTranscriptionCreate(FixtureAPITestCase): response = self.client.post(reverse('api:transcription-create'), format='json', data={ "type": "word", "element": str(self.page.id), + "source": self.src.id, "polygon": [(0, 0), (100, 0), (100, 100), (0, 100), (0, 0)], "text": "NEKUDOTAYIM", "score": 0.83, @@ -36,6 +40,7 @@ class TestTranscriptionCreate(FixtureAPITestCase): new_ts = Transcription.objects.get(text="NEKUDOTAYIM", type=TranscriptionType.Word) self.assertEqual(new_ts.zone.polygon, Polygon.from_coords(0, 0, 100, 100)) self.assertEqual(new_ts.score, 0.83) + self.assertEqual(new_ts.source, self.src) self.assertTrue(self.page.transcriptions.filter(pk=new_ts.id).exists()) self.assertTrue(indexer.return_value.run_index.called) @@ -48,13 +53,13 @@ class TestTranscriptionCreate(FixtureAPITestCase): response = self.client.post(reverse('api:transcription-create'), format='json', data={ "type": "word", "element": str(self.page.id), + "source": self.src.id, "polygon": ts.zone.polygon.serialize(), "text": "GLOUBIBOULGA", "score": 0.8, }) self.assertEqual(response.status_code, status.HTTP_201_CREATED) - self.assertEqual( - Transcription.objects.get(text="GLOUBIBOULGA").zone.id, ts.zone.id) + self.assertEqual(Transcription.objects.get(text="GLOUBIBOULGA").zone.id, ts.zone.id) def test_update_transcription(self): """ @@ -66,6 +71,7 @@ class TestTranscriptionCreate(FixtureAPITestCase): response = self.client.post(reverse('api:transcription-create'), format='json', data={ "type": "word", "element": str(self.page.id), + "source": ts.source_id, "polygon": ts.zone.polygon.serialize(), "text": ts.text, "score": 0.99, @@ -85,6 +91,7 @@ class TestTranscriptionCreate(FixtureAPITestCase): post_data = { "type": "word", "element": str(self.page.id), + "source": self.src.id, "polygon": [(0, 0), (0, 100), (100, 100), (100, 0), (0, 0)], "text": "NEKUDOTAYIM", "score": 0.83, @@ -121,6 +128,7 @@ class TestTranscriptionCreate(FixtureAPITestCase): response = self.client.post(reverse('api:transcription-bulk'), format='json', data={ "parent": str(self.page.id), "image": str(self.page.zone.image.id), + "source": self.src.id, "transcriptions": [ { "type": "word", @@ -140,6 +148,7 @@ class TestTranscriptionCreate(FixtureAPITestCase): new_ts = Transcription.objects.get(text="NEKUDOTAYIM", type=TranscriptionType.Word) self.assertEqual(new_ts.zone.polygon, Polygon.from_coords(0, 0, 100, 100)) self.assertEqual(new_ts.score, 0.83) + self.assertEqual(new_ts.source, self.src) self.assertTrue(self.page.transcriptions.filter(pk=new_ts.id).exists()) # indexer called diff --git a/arkindex/images/importer.py b/arkindex/images/importer.py index 0a22b48b9ea44e988bf0d3ebdf29f89d158d1dc6..f31b0c447df8e968492bf3c6d8a7452e6604f419 100644 --- a/arkindex/images/importer.py +++ b/arkindex/images/importer.py @@ -3,7 +3,7 @@ from abc import ABC, abstractmethod from django.db import connection from django.conf import settings from arkindex.images.models import Image -from arkindex.documents.models import TranscriptionType, Element, Page, ElementType, Transcription +from arkindex.documents.models import TranscriptionType, Element, Page, ElementType, Transcription, DataSource from arkindex.project.polygon import Polygon from arkindex.project.tools import Timer from arkindex.documents.indexer import Indexer @@ -23,7 +23,7 @@ logger = logging.getLogger(__name__) # Link a transcription data with a Polygon # This is hashable (box is hashable) -TrPolygon = namedtuple('TrPolygon', 'image_id, element_id, type, polygon, text, score') +TrPolygon = namedtuple('TrPolygon', 'image_id, element_id, source_id, type, polygon, text, score') def extract_transcriptions(image, page, index_path, extension='jpg'): @@ -66,7 +66,7 @@ def extract_transcriptions(image, page, index_path, extension='jpg'): return lines -def build_transcriptions(image, parent, items): +def build_transcriptions(image, parent, source, items): """ Build needed TrPolygon namedtuples from parsed index files """ @@ -77,6 +77,7 @@ def build_transcriptions(image, parent, items): TrPolygon( image.id, parent.id, + source.id, i.get('type', TranscriptionType.Word), Polygon.from_dict(i), i['text'], @@ -90,6 +91,7 @@ def build_transcriptions(image, parent, items): TrPolygon( tr.zone.image_id, tr.element_id, + tr.source_id, tr.type, tr.zone.polygon, tr.text, @@ -117,8 +119,22 @@ def save_transcriptions(*tr_polygons, delimiter='\t', quotechar='"'): def new_transcription(tr_polygon): zone_id = uuid.uuid4() return ( - (uuid.uuid4(), tr_polygon.element_id, zone_id, tr_polygon.type.value, tr_polygon.text, tr_polygon.score), - (zone_id, tr_polygon.image_id, tr_polygon.polygon.serialize(as_string=True), now, now), + ( + uuid.uuid4(), + tr_polygon.element_id, + tr_polygon.source_id, + zone_id, + tr_polygon.type.value, + tr_polygon.text, + tr_polygon.score, + ), + ( + zone_id, + tr_polygon.image_id, + tr_polygon.polygon.serialize(as_string=True), + now, + now, + ), ) def _list_to_csv(rows): @@ -145,7 +161,7 @@ def save_transcriptions(*tr_polygons, delimiter='\t', quotechar='"'): cursor.copy_from( _list_to_csv(transcriptions), 'documents_transcription', - columns=('id', 'element_id', 'zone_id', 'type', 'text', 'score'), + columns=('id', 'element_id', 'source_id', 'zone_id', 'type', 'text', 'score'), sep=delimiter, ) @@ -181,12 +197,14 @@ def index_transcriptions(transcriptions): class BaseIndexImporter(ABC): """Import index files (.idx.gz) as transcriptions.""" - def __init__(self, path, volume): + def __init__(self, path, volume, source): assert os.path.exists(path) assert isinstance(volume, Element) assert volume.type == ElementType.Volume + assert isinstance(source, DataSource) self.path = path self.volume = volume + self.source = source logger.debug('Fetching pages for volume {}'.format(str(self.volume))) self.pages = list(Page.objects.get_descending(self.volume.id).prefetch_related('zone', 'zone__image')) @@ -257,7 +275,7 @@ class BaseIndexImporter(ABC): logger.debug('extract_transcriptions: {}'.format(t.delta)) with Timer() as t: - polygons = build_transcriptions(image, page, lines) + polygons = build_transcriptions(image, page, self.source, lines) for polygon in polygons: queue.put(polygon) # will block until a slot is free @@ -304,10 +322,10 @@ class IndexImporter(BaseIndexImporter): DEFAULT_MASK = r'(?:.*/)?([^/]+)(?:_[a-zA-Z]*)?\.idx\.gz' - def __init__(self, path, volume, mask=DEFAULT_MASK): + def __init__(self, path, volume, source, mask=DEFAULT_MASK): self.mask = re.compile(mask) logger.debug('Using mask {}'.format(self.mask.pattern)) - super().__init__(path, volume) + super().__init__(path, volume, source) self.images = [p.zone.image for p in self.pages] def get_image(self, path): @@ -328,8 +346,8 @@ class GallicaIndexImporter(BaseIndexImporter): REGEX = re.compile(r'.*_0*([0-9]+)(?:_[a-z]+)?\.idx\.gz') - def __init__(self, path, volume): - super().__init__(path, volume) + def __init__(self, *args, **kwargs): + super().__init__(*args, **kwargs) self.images = { p.zone.image.path.rpartition('/')[2]: p.zone.image for p in self.pages diff --git a/arkindex/images/tests.py b/arkindex/images/tests.py index 80b43410ea48b74d666a8aac5d248e13f925d142..945edb6a30583d41ce21b9bf6457df7cbb82d69d 100644 --- a/arkindex/images/tests.py +++ b/arkindex/images/tests.py @@ -1,6 +1,6 @@ from arkindex.project.tests import FixtureTestCase from arkindex.project.polygon import Polygon -from arkindex.documents.models import Transcription, TranscriptionType +from arkindex.documents.models import Transcription, TranscriptionType, DataSource from arkindex.images.models import Image, ImageServer, ImageStatus from arkindex.images.importer import build_transcriptions, save_transcriptions @@ -8,11 +8,13 @@ from arkindex.images.importer import build_transcriptions, save_transcriptions class TestBulkTranscriptions(FixtureTestCase): """Tests for bulk transcription and zone importing""" - def setUp(self): - # Create a page and an image - self.img = Image.objects.get(path='img6', server=self.imgsrv) - pagezone = self.img.zones.first() - self.page = pagezone.elements.first() + @classmethod + def setUpTestData(cls): + super().setUpTestData() + cls.img = Image.objects.get(path='img6', server=cls.imgsrv) + pagezone = cls.img.zones.first() + cls.page = pagezone.elements.first() + cls.src = DataSource.objects.get(slug='test') def test_bulk_transcriptions(self): items = [ @@ -33,7 +35,7 @@ class TestBulkTranscriptions(FixtureTestCase): 'score': 0.2, }, ] - trpolygons = build_transcriptions(self.img, self.page, items) + trpolygons = build_transcriptions(self.img, self.page, self.src, items) save_transcriptions(*trpolygons) out = Transcription.objects.filter(zone__image=self.img).order_by('score') @@ -53,6 +55,9 @@ class TestBulkTranscriptions(FixtureTestCase): self.assertEqual(out[0].zone.polygon, Polygon.from_coords(0, 0, 100, 100)) self.assertEqual(out[1].zone.polygon, Polygon.from_coords(20, 20, 100, 100)) + self.assertEqual(out[0].source, self.src) + self.assertEqual(out[1].source, self.src) + # Check path children = self.page.transcriptions.all() self.assertEqual(children.count(), 2) @@ -80,10 +85,10 @@ class TestBulkTranscriptions(FixtureTestCase): 'score': 0.2, }, ] - trpolygons = build_transcriptions(self.img, self.page, items) + trpolygons = build_transcriptions(self.img, self.page, self.src, items) self.assertEqual(len(trpolygons), 2) save_transcriptions(*trpolygons) - trpolygons = build_transcriptions(self.img, self.page, items) + trpolygons = build_transcriptions(self.img, self.page, self.src, items) self.assertEqual(len(trpolygons), 0) def test_bulk_transcriptions_polygons(self): @@ -101,7 +106,7 @@ class TestBulkTranscriptions(FixtureTestCase): 'type': TranscriptionType.Line, }, ] - trpolygons = build_transcriptions(self.img, self.page, items) + trpolygons = build_transcriptions(self.img, self.page, self.src, items) self.assertEqual(len(trpolygons), 2) save_transcriptions(*trpolygons) @@ -126,7 +131,7 @@ class TestBulkTranscriptions(FixtureTestCase): self.assertEqual(trs[1].zone.polygon, Polygon.from_coords(0, 0, 100, 100)) # should not recreate - trpolygons = build_transcriptions(self.img, self.page, items) + trpolygons = build_transcriptions(self.img, self.page, self.src, items) self.assertEqual(len(trpolygons), 0) diff --git a/arkindex/project/settings.py b/arkindex/project/settings.py index 7a2d2e5bfc4be769641635d3813da688a552d22d..45184c06e16ce78b627c13cdc6e092125e441696 100644 --- a/arkindex/project/settings.py +++ b/arkindex/project/settings.py @@ -34,6 +34,7 @@ BASE_DIR = os.path.dirname(os.path.dirname(os.path.abspath(__file__))) LOGS_DIR = os.environ.get('LOGS_DIR', os.path.realpath(os.path.join(BASE_DIR, '../logs'))) if not os.path.isdir(LOGS_DIR): os.makedirs(LOGS_DIR) +ML_CLASSIFIERS_DIR = os.environ.get('ML_CLASSIFIERS_DIR', os.path.join(BASE_DIR, '../../ml-classifiers')) # SECURITY WARNING: keep the secret key used in production secret! SECRET_KEY = os.environ.get('SECRET_KEY', 'jf0w^y&ml(caax8f&a1mub)(js9(l5mhbbhosz3gi+m01ex+lo') diff --git a/requirements.txt b/requirements.txt index 529d594832ec89a33de60de40b692289ae5d379b..694900e2615acb9c57155021a189b572067a8d4d 100644 --- a/requirements.txt +++ b/requirements.txt @@ -22,3 +22,4 @@ PyYAML==3.13 requests==2.18.4 roman==2.0.0 urllib3==1.22 +git+https://gitlab.com/arkindex/common.git#egg=arkindex-common