From cabab1dfa99c16cced828c7e6b456eec724971d2 Mon Sep 17 00:00:00 2001
From: Charlotte Mauvezin <charlotte.mauvezin@irht.cnrs.fr>
Date: Wed, 5 Jan 2022 11:43:41 +0100
Subject: [PATCH] Correctif
---
nerval/evaluate.py | 10 ++++------
1 file changed, 4 insertions(+), 6 deletions(-)
diff --git a/nerval/evaluate.py b/nerval/evaluate.py
index 4eef4f8..73109d7 100644
--- a/nerval/evaluate.py
+++ b/nerval/evaluate.py
@@ -666,15 +666,13 @@ def main():
if args.annot:
if not args.predict:
- raise argparse.ArgumentError(
- args.folder, "You need to specify the path to a predict file"
- )
+ raise parser.error("You need to specify the path to a predict file with -p")
if args.annot and args.predict:
run(args.annot, args.predict, args.threshold, args.verbose)
elif args.csv:
- if not args.csv:
- raise argparse.ArgumentError(
- args.folder, "You need to specify the path to a folder of bio files"
+ if not args.folder:
+ raise parser.error(
+ "You need to specify the path to a folder of bio files with -f"
)
if args.folder and args.csv:
run_multiple(args.csv, args.folder, args.threshold, args.verbose)
--
GitLab