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Named Entity Recognition
nerval
Commits
54076686
Commit
54076686
authored
1 year ago
by
Eva Bardou
Committed by
Yoann Schneider
1 year ago
Browse files
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Plain Diff
Fix typo + Nits
parent
c844e024
No related branches found
No related tags found
1 merge request
!39
Utils method to print a Markdown table
Pipeline
#150450
passed
1 year ago
Stage: test
Changes
2
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1
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2 changed files
nerval/evaluate.py
+2
-2
2 additions, 2 deletions
nerval/evaluate.py
nerval/utils.py
+6
-5
6 additions, 5 deletions
nerval/utils.py
with
8 additions
and
7 deletions
nerval/evaluate.py
+
2
−
2
View file @
54076686
...
...
@@ -14,7 +14,7 @@ from nerval.parse import (
look_for_further_entity_part
,
parse_bio
,
)
from
nerval.utils
import
print_mardown_table
,
print_result_compact
,
print_results
from
nerval.utils
import
print_mar
k
down_table
,
print_result_compact
,
print_results
logger
=
logging
.
getLogger
(
__name__
)
...
...
@@ -395,4 +395,4 @@ def run_multiple(file_csv: Path, folder: Path, threshold: int, verbose: bool):
round
(
recall
/
count
,
3
),
round
(
f1
/
count
,
3
),
]
print_mardown_table
([
"
Precision
"
,
"
Recall
"
,
"
F1
"
],
[
result
])
print_mar
k
down_table
([
"
Precision
"
,
"
Recall
"
,
"
F1
"
],
[
result
])
This diff is collapsed.
Click to expand it.
nerval/utils.py
+
6
−
5
View file @
54076686
from
prettytable
import
MARKDOWN
,
PrettyTable
def
print_mardown_table
(
header
:
list
[
str
],
rows
:
list
[
list
]):
def
print_markdown_table
(
header
:
list
[
str
],
rows
:
list
[
list
])
->
None
:
"""
Prints a Markdown table filled with the provided header and rows.
"""
table
=
PrettyTable
()
table
.
field_names
=
header
table
.
set_style
(
MARKDOWN
)
...
...
@@ -9,7 +10,7 @@ def print_mardown_table(header: list[str], rows: list[list]):
print
(
table
)
def
print_results
(
scores
:
dict
):
def
print_results
(
scores
:
dict
)
->
None
:
"""
Display final results.
None values are kept to indicate the absence of a certain tag in either annotation or prediction.
...
...
@@ -32,13 +33,13 @@ def print_results(scores: dict):
],
)
print_mardown_table
(
print_mar
k
down_table
(
[
"
tag
"
,
"
predicted
"
,
"
matched
"
,
"
Precision
"
,
"
Recall
"
,
"
F1
"
,
"
Support
"
],
results
,
)
def
print_result_compact
(
scores
:
dict
):
def
print_result_compact
(
scores
:
dict
)
->
None
:
result
=
[
"
All
"
,
scores
[
"
All
"
][
"
predicted
"
],
...
...
@@ -48,7 +49,7 @@ def print_result_compact(scores: dict):
round
(
scores
[
"
All
"
][
"
F1
"
],
3
),
scores
[
"
All
"
][
"
Support
"
],
]
print_mardown_table
(
print_mar
k
down_table
(
[
"
tag
"
,
"
predicted
"
,
"
matched
"
,
"
Precision
"
,
"
Recall
"
,
"
F1
"
,
"
Support
"
],
[
result
],
)
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